RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
PUDP-201ENST00000381077 AKIRIN2Q53H80 203 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 PRAMEF6Q5VXH4 476 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 ZNF826PQ6ZT77 177 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 OR10P1Q8NGE3 313 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 MRGPRDQ8TDS7 321 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 TCTEX1D2Q8WW35 142 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 RCC1LQ96I51 464 aaKnown RBP10.58□□□□□ -0.72
PUDP-201ENST00000381077 OR4C12Q96R67 309 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 AGMATQ9BSE5 352 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 RSG1Q9BU20 258 aa10.58□□□□□ -0.72
PUDP-201ENST00000381077 SPAARA0A1B0GVQ0 90 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 A0A1W2PPH5 198 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 WISP2O76076 250 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 SPINK2P20155 84 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 TIMP3P35625 211 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
PUDP-201ENST00000381077 RPL30P62888 115 aaKnown RBP10.57□□□□□ -0.72
PUDP-201ENST00000381077 RPP30P78346 268 aaKnown RBP10.57□□□□□ -0.72
PUDP-201ENST00000381077 FOXF2Q12947 444 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 IZUMO4Q1ZYL8 232 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 H2BFWTQ7Z2G1 175 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 IQCF2Q8IXL9 164 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 CYB561D1Q8N8Q1 229 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 LRRC29Q8WV35 223 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 RAB39BQ96DA2 213 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 C5orf30Q96GV9 206 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 ESRP2Q9H6T0 727 aaKnown RBP10.57□□□□□ -0.72
PUDP-201ENST00000381077 RFNGQ9Y644 331 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 PMS2P5A8MQ11 134 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 F2RL2O00254 374 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 HPRT1P00492 218 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 WT1P19544 449 aaPredicted RBP10.57□□□□□ -0.72
PUDP-201ENST00000381077 GATA4P43694 442 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 FABP6P51161 128 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 OR13A1Q8NGR1 328 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 OR13D1Q8NGV5 346 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 DTD1Q8TEA8 209 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 ZNF251Q9BRH9 671 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 C20orf24Q9BUV8 137 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 OR6C3Q9NZP0 311 aa10.57□□□□□ -0.72
PUDP-201ENST00000381077 DMDP11532 3685 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 IGLV3-9A0A075B6K5 115 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 A0A1B0GV50 99 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 MED19A0JLT2 244 aaPredicted RBP10.56□□□□□ -0.72
PUDP-201ENST00000381077 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 RAMP3O60896 148 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 S1PR2O95136 353 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 KRASP01116 189 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 IGHV2-5P01817 119 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 CRYABP02511 175 aaKnown RBP10.56□□□□□ -0.72
PUDP-201ENST00000381077 SMIM6P0DI80 62 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 G6PCP35575 357 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 AKR1C3P42330 323 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 GLIPR1P48060 266 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 MEOX2P50222 304 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 AKR1D1P51857 326 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 DLK1P80370 383 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 RTP5Q14D33 572 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 TMEM249Q2WGJ8 235 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 DEFB109BQ30KR1 87 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 Q6ZS92 163 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 GGACTQ9BVM4 153 aa10.56□□□□□ -0.72
PUDP-201ENST00000381077 CTXND1A0A1B0GTU2 59 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 A0A1W2PPE2 198 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 C17orf112F2Z3M2 114 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 RAB7AP51149 207 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 BRWD1-AS2P59051 145 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 SRSF6Q13247 344 aaKnown RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 FAM90A2PQ658T7 463 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 SEM1Q6ZVN7 128 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 SSX8Q7RTT4 187 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 CD177Q8N6Q3 437 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 CA5BP1Q8WTZ4 195 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 ISOC2Q96AB3 205 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 SFXN3Q9BWM7 321 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 CTDSP1Q9GZU7 261 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 OPN3Q9H1Y3 402 aaPredicted RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 MSL2Q9HCI7 577 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 GNG13Q9P2W3 67 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 COL6A3P12111 3177 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 MAP1LC3B2A6NCE7 125 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 C17orf98A8MV24 154 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 TMEM250H0YL14 139 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 MPDU1O75352 247 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 LHBP01229 141 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 CRYAAP02489 173 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 MDKP21741 143 aaPredicted RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 DUTP33316 252 aaKnown RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 SSTR5P35346 364 aa10.55□□□□□ -0.72
PUDP-201ENST00000381077 RPL35P42766 123 aaKnown RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 NKX6-1P78426 367 aaPredicted RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 ZNF816Q0VGE8 651 aaPredicted RBP10.55□□□□□ -0.72
PUDP-201ENST00000381077 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms