RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ODAMA1E959 279 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 C5orf52A6NGY3 159 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 NPIPB13A6NJU9 1138 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 ZNF98A6NK75 572 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 NPIPB4C9JG80 1138 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 UNC119Q13432 240 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 STPG1Q5TH74 334 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 BPIFA4PQ86YQ2 179 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 PRDM14Q9GZV8 571 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 RBKSQ9H477 322 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 G6PC2Q9NQR9 355 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 DLX1P56177 255 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 SRSF9Q13242 221 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL2A1-202ENST00000380518 GPR146Q96CH1 333 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 ID1P41134 155 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 DNASE2BQ8WZ79 361 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 Q96M66 194 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 DIRC3C9JPN6 131 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 SUCLG1P53597 346 aaKnown RBP13.82□□□□□ -0.2
COL2A1-202ENST00000380518 POM121Q96HA1 1249 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 LPAR2Q9HBW0 351 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 TMEM140Q9NV12 185 aa13.82□□□□□ -0.2
COL2A1-202ENST00000380518 NKX2-8O15522 239 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 ADRA2AP08913 450 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 LAIR2Q6ISS4 152 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 ZNF552Q9H707 407 aaPredicted RBP13.81□□□□□ -0.2
COL2A1-202ENST00000380518 IFITM10A6NMD0 228 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 FTH1P19P0C7X4 201 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 OR4A5Q8NH83 315 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 ZDHHC8Q9ULC8 765 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 KLF7O75840 302 aaPredicted RBP13.81□□□□□ -0.2
COL2A1-202ENST00000380518 CLDN18P56856 261 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 CDC42EP3Q9UKI2 254 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 COL4A1P02462 1669 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 ZNF273Q14593 569 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 C5orf66Q9H5L9 145 aa13.81□□□□□ -0.2
COL2A1-202ENST00000380518 NDUFA2O43678 99 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 STARD6P59095 220 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 SHISA5Q8N114 240 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 OR4C12Q96R67 309 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 TBX15Q96SF7 602 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 CALYQ9NYX4 217 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 UBR3Q6ZT12 1888 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 DLL1O00548 723 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 SELENOHQ8IZQ5 122 aaKnown RBP13.8□□□□□ -0.2
COL2A1-202ENST00000380518 LY75O60449 1722 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 TMEM14DPA8MWL7 114 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 IFNL4K9M1U5 179 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 CFDP00746 253 aaPredicted RBP13.8□□□□□ -0.2
COL2A1-202ENST00000380518 COX6A1P12074 109 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 H2BFSP57053 126 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.8□□□□□ -0.2
COL2A1-202ENST00000380518 IGHMP01871 453 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 CTSBP07858 339 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 AREGP15514 252 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 MDKP21741 143 aaPredicted RBP13.8□□□□□ -0.2
COL2A1-202ENST00000380518 IZUMO4Q1ZYL8 232 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 RBM14Q96PK6 669 aaKnown RBP13.8□□□□□ -0.2
COL2A1-202ENST00000380518 PILRBQ9UKJ0 227 aa13.8□□□□□ -0.2
COL2A1-202ENST00000380518 CD74P04233 296 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 IGKV3-11P04433 115 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 HSPE1P61604 102 aaKnown RBP13.79□□□□□ -0.2
COL2A1-202ENST00000380518 IBA57Q5T440 356 aaKnown RBP13.79□□□□□ -0.2
COL2A1-202ENST00000380518 IL36RNQ9UBH0 155 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 DOCK5Q9H7D0 1870 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 IGHV3-72A0A0B4J1Y9 119 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 STAG3L2P0CL84 134 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 RPS11P62280 158 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL2A1-202ENST00000380518 ZNF430Q9H8G1 570 aaPredicted RBP13.79□□□□□ -0.2
COL2A1-202ENST00000380518 COL4A5P29400 1685 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 ZNHIT1O43257 154 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 LOXL3P58215 753 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 PCOLCEQ15113 449 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 WFDC3Q8IUB2 231 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 SPSB2Q99619 263 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 WNT5BQ9H1J7 359 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 METTL1Q9UBP6 276 aaKnown RBP13.79□□□□□ -0.2
COL2A1-202ENST00000380518 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 MIA3Q5JRA6 1907 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 A0A1W2PQM1 296 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 KIR2DL2P43627 348 aaPredicted RBP13.79□□□□□ -0.2
COL2A1-202ENST00000380518 TMEM78Q5T7P6 136 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 MIC13Q5XKP0 118 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
COL2A1-202ENST00000380518 TMEM189A5PLL7 270 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 ERVH48-1M5A8F1 160 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 HCP5Q6MZN7 132 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 TRGC2P03986 189 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 RPLP1P05386 114 aaKnown RBP13.78□□□□□ -0.2
COL2A1-202ENST00000380518 SNRPCP09234 159 aaKnown RBP13.78□□□□□ -0.2
COL2A1-202ENST00000380518 CTSSP25774 331 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 PTGDSP41222 190 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 SLC35B1P78383 322 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 TNFRSF9Q07011 255 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 IDI2-AS1Q9NZ38 188 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 LOC390937A0A1W2PQ73 354 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
COL2A1-202ENST00000380518 UCP3P55916 312 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms