RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 H0YIZ8 118 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 SPRY3O43610 288 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 SCGB1D1O95968 90 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 TK1P04183 234 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 TBPP20226 339 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 GNRHRP30968 328 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 OR3A1P47881 315 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 RAB9AP51151 201 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 TAS2R31P59538 309 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 C11orf42Q8N5U0 333 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 STARD4Q96DR4 205 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 SCGB3A2Q96PL1 93 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 UBE2J1Q9Y385 318 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-201ENST00000379433 YLPM1P49750 1951 aaKnown RBP9.15□□□□□ -0.95
NEDD9-201ENST00000379433 IGHV3OR15-7A0A075B7D8 119 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 IGHV3-43A0A0B4J1X8 118 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 A8MXK9 166 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 MKRN2OSH3BPM6 223 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 AGPAT2O15120 278 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 LRP3O75074 770 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 IGHV3-43DP0DP04 118 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 C4BPBP20851 252 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 FBXW12Q6X9E4 464 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 C22orf34Q6ZV56 151 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 SEM1Q6ZVN7 128 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 RBMXL3Q8N7X1 1067 aaKnown RBP9.15□□□□□ -0.95
NEDD9-201ENST00000379433 PXT1Q8NFP0 134 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 OR5A2Q8NGI9 324 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 RAB9BQ9NP90 201 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 CCL28Q9NRJ3 127 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 OR1A1Q9P1Q5 309 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 LHX6Q9UPM6 363 aa9.15□□□□□ -0.95
NEDD9-201ENST00000379433 TSSC4Q9Y5U2 329 aaPredicted RBP9.15□□□□□ -0.95
NEDD9-201ENST00000379433 KMT2EQ8IZD2 1858 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
NEDD9-201ENST00000379433 IGKV1D-13A0A0B4J2D9 117 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 PROB1E7EW31 1015 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 GNG7O60262 68 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 SS18L1O75177 396 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-201ENST00000379433 PPYP01298 95 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 IGKV1-13P0DP09 117 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 DAOP14920 347 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 CDKN1AP38936 164 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 GABRA2P47869 451 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 FGF12P61328 243 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 OR2A2Q6IF42 318 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 GAPTQ8N292 157 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 DMBX1Q8NFW5 382 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 TMED6Q8WW62 240 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 RTL8AQ9BWD3 113 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 REG4Q9BYZ8 158 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 KIF25Q9UIL4 384 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 CSMD1Q96PZ7 3565 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 TUSC2O75896 110 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 GPR12P47775 334 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 DAZAP2Q15038 168 aaPredicted RBP9.14□□□□□ -0.95
NEDD9-201ENST00000379433 KRTAP27-1Q3LI81 207 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 GGNBP1Q5YKI7 109 aa9.14□□□□□ -0.95
NEDD9-201ENST00000379433 F6UZH7 168 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 F8WDY8 70 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 TNFSF13O75888 250 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 IGHG3P01860 377 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 OR8U9P0C7N5 309 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF660Q6AZW8 331 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-201ENST00000379433 C1orf87Q8N0U7 546 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF808Q8N4W9 903 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-201ENST00000379433 BVESQ8NE79 360 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 OR1S1Q8NH92 325 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 TMEM100Q9NV29 134 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 SS18L2Q9UHA2 77 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 TUBD1Q9UJT1 453 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 CENPEQ02224 2701 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 TRAV24A0A0B4J272 114 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 RNF222A6NCQ9 220 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 OR2H2O95918 312 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 AGAP20933 346 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 RBM39Q14498 530 aaKnown RBP9.13□□□□□ -0.95
NEDD9-201ENST00000379433 COX19Q49B96 90 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF562Q6V9R5 426 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 LHFPL1Q86WI0 220 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 TP53RKQ96S44 253 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 DCTN5Q9BTE1 182 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 RSRP1Q9BUV0 290 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 FAM234AQ9H0X4 552 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 ARV1Q9H2C2 271 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF107Q9UII5 783 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-201ENST00000379433 A8MWP6 167 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 H3BP45 60 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 NBL1P41271 181 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 HAGHQ16775 308 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 NRN1LQ496H8 165 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 C4orf17Q53FE4 359 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 OXLD1Q5BKU9 147 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 ZNF474Q6S9Z5 364 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-201ENST00000379433 WDR31Q8NA23 367 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
NEDD9-201ENST00000379433 C1orf123Q9NWV4 160 aa9.13□□□□□ -0.95
NEDD9-201ENST00000379433 IFNA17P01571 189 aa9.12□□□□□ -0.95
NEDD9-201ENST00000379433 HERPUD1Q15011 391 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms