RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 FGF20Q9NP95 211 aaPredicted RBP13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 MRPS18AQ9NVS2 196 aaKnown RBP13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 BABAM2Q9NXR7 383 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 SLC23A1Q9UHI7 598 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 PLECQ15149 4684 aaKnown RBP13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 LOC100130705A0A1B0GUX0 176 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 H3BNX3 289 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 SLC22A1O15245 554 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 RBBP9O75884 186 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 CNIH1O95406 144 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 TRBV12-3P01733 135 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 GLAP06280 429 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 MYL12AP19105 171 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 FSTP19883 344 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 MC5RP33032 325 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 KLF5Q13887 457 aaPredicted RBP13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 YIF1BQ5BJH7 314 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 IL34Q6ZMJ4 242 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 NRG4Q8WWG1 115 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 FAAP24Q9BTP7 215 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 HIPK2Q9H2X6 1198 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 CLEC2DQ9UHP7 191 aa13.53□□□□□ -0.24
PDLIM4-202ENST00000379018 SLC25A17O43808 307 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 GPX5O75715 221 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 APELAP0DMC3 54 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 DCKP27707 260 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 LINC00205P59089 165 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 CD81P60033 236 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 RPS11P62280 158 aaKnown RBP eCLIP13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 LY6G6FQ5SQ64 297 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 OR10K2Q6IF99 312 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 C6orf201Q7Z4U5 140 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 Q8N402 240 aa13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 TSNAXQ99598 290 aaKnown RBP13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 THAP7Q9BT49 309 aaPredicted RBP13.52□□□□□ -0.25
PDLIM4-202ENST00000379018 TRBV5-7A0A0A0MS05 114 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 A0A0G2JLM5 398 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 SHISA3A0PJX4 238 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 IGKV1-16P04430 117 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 CSN3P07498 182 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 DYRK1AQ13627 763 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 RPEL1Q2QD12 228 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 OGFRL1Q5TC84 451 aaPredicted RBP13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 SVOPQ8N4V2 548 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 PGLYRP3Q96LB9 341 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 KCNK15Q9H427 330 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 OR1A1Q9P1Q5 309 aa13.51□□□□□ -0.25
PDLIM4-202ENST00000379018 WBP4O75554 376 aaKnown RBP13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 BRI3O95415 125 aa13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 PQLC1Q8N2U9 271 aa13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 OR5AN1Q8NGI8 311 aa13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 SLC29A1Q99808 456 aa13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 COA4Q9NYJ1 87 aa13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 PEF1Q9UBV8 284 aaKnown RBP13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 EXOSC1Q9Y3B2 195 aaKnown RBP13.5□□□□□ -0.25
PDLIM4-202ENST00000379018 TPPPO94811 219 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 CEACAM6P40199 344 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 PJVKQ0ZLH3 352 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 TATDN3Q17R31 274 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 RNLSQ5VYX0 342 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 DEFB125Q8N687 156 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 BVESQ8NE79 360 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 DERL3Q96Q80 235 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 RNF5Q99942 180 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 NICN1Q9BSH3 213 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 C9orf16Q9BUW7 83 aa13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 C11orf54Q9H0W9 315 aaPredicted RBP13.49□□□□□ -0.25
PDLIM4-202ENST00000379018 H3BUA1 57 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 SPDEFO95238 335 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 LY6G6CO95867 125 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 APOA2P02652 100 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 MOGAT2Q3SYC2 334 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 NKAIN3Q8N8D7 197 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 ZNF383Q8NA42 475 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 PHB2Q99623 299 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 NEURL2Q9BR09 285 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 HDHD3Q9BSH5 251 aaPredicted RBP13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 TMEM59Q9BXS4 323 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 SRD5A3Q9H8P0 318 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 C8orf4Q9NR00 106 aa13.48□□□□□ -0.25
PDLIM4-202ENST00000379018 RBMY1BA6NDE4 496 aaKnown RBP13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 RBMY1EA6NEQ0 496 aaKnown RBP13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 CD7P09564 240 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 RBMY1DP0C7P1 496 aaKnown RBP13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 LGALS7P47929 136 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 HSPA13P48723 471 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 GUCA2BQ16661 112 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 CDH26Q8IXH8 852 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 DYNLRB2Q8TF09 96 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 EDARADDQ8WWZ3 215 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 AGMATQ9BSE5 352 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 SLC2A8Q9NY64 477 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 ZNF221Q9UK13 617 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 SELENOKQ9Y6D0 94 aa13.47□□□□□ -0.25
PDLIM4-202ENST00000379018 A0A0B4J203 849 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 IRGMA1A4Y4 181 aa13.46□□□□□ -0.25
PDLIM4-202ENST00000379018 M0R1X1 148 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms