RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 OR2A7Q96R45 310 aa12.2□□□□□ -0.46
TRIM13-202ENST00000378182 TMEM74BQ9NUR3 256 aa12.2□□□□□ -0.46
TRIM13-202ENST00000378182 C11orf91Q3C1V1 193 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 TMEM101Q96IK0 257 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 NHSL1Q5SYE7 1610 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 HOXC8P31273 242 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 OR4D11Q8NGI4 311 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 FOXH1O75593 365 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 P2RY1P47900 373 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 BSXQ3C1V8 233 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 DPPA3Q6W0C5 159 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 VN1R17PQ8TDU5 208 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 ZNF501Q96CX3 271 aaPredicted RBP12.19□□□□□ -0.46
TRIM13-202ENST00000378182 LOXL4Q96JB6 756 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 NUDT16L1Q9BRJ7 211 aaKnown RBP12.19□□□□□ -0.46
TRIM13-202ENST00000378182 PXMP4Q9Y6I8 212 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 PDE6DO43924 150 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 RP1L1Q8IWN7 2480 aaPredicted RBP12.19□□□□□ -0.46
TRIM13-202ENST00000378182 TCRBV16S1A1N1A0A5B0 115 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 CTSDP07339 412 aaPredicted RBP12.19□□□□□ -0.46
TRIM13-202ENST00000378182 SCTP09683 121 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 LINC00869P0C866 280 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 RND2P52198 227 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 FXYD3Q14802 87 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 SLC25A45Q8N413 288 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 OR8D4Q8NGM9 314 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 FER1L5A0AVI2 2057 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 CDKN1AP38936 164 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 BPIFA4PQ86YQ2 179 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 ATG101Q9BSB4 218 aa12.19□□□□□ -0.46
TRIM13-202ENST00000378182 PLXNA1Q9UIW2 1896 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 IGHV3OR16-8A0A075B7F1 116 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 KBTBD11O94819 623 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRIM13-202ENST00000378182 PHYHIPLQ96FC7 376 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 LINC01587Q99440 93 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 Q9N2K0 584 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 BGLAPP02818 100 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 TOMM7Q9P0U1 55 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 DXOO77932 396 aaKnown RBP12.18□□□□□ -0.46
TRIM13-202ENST00000378182 OR10J1P30954 320 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 KIAA1551Q9HCM1 1747 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 MALP21145 153 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 C3orf36Q3SXR2 165 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 MBNL2Q5VZF2 373 aaKnown RBP12.18□□□□□ -0.46
TRIM13-202ENST00000378182 PRSS54Q6PEW0 395 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 FAM159AQ6UWV7 190 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 MRPL13Q9BYD1 178 aaKnown RBP12.18□□□□□ -0.46
TRIM13-202ENST00000378182 C11orf68Q9H3H3 251 aaKnown RBP12.18□□□□□ -0.46
TRIM13-202ENST00000378182 AKIP1Q9NQ31 210 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 THADAQ6YHU6 1953 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 TRAV20A0A0B4J274 112 aa12.18□□□□□ -0.46
TRIM13-202ENST00000378182 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
TRIM13-202ENST00000378182 RELQ04864 619 aaPredicted RBP12.18□□□□□ -0.46
TRIM13-202ENST00000378182 PGPA6NDG6 321 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 FOXI3A8MTJ6 420 aaPredicted RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 HPRT1P00492 218 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 CA2P00918 260 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 LIPFP07098 398 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 VDAC2P45880 294 aaPredicted RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 F11RQ9Y624 299 aaKnown RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 TUBGCP6Q96RT7 1819 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 TDGF1P13385 188 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 RBM11P57052 281 aaKnown RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 SNRPEP62304 92 aaKnown RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 ANKRD36A6QL64 1941 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 EIF3GO75821 320 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 NPPCP23582 126 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 MPV17P39210 176 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 CEACAM21Q3KPI0 293 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 NCMAPQ5T1S8 102 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 LRRC3BQ96PB8 259 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 OTX1P32242 354 aaPredicted RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 GLMPQ8WWB7 406 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 OR4C45A6NMZ5 311 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 S1PR2O95136 353 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 IGKV1D-16P01601 117 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 MC5RP33032 325 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 RNASE4P34096 147 aaKnown RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 NUTF2P61970 127 aaKnown RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
TRIM13-202ENST00000378182 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 VGLL1Q99990 258 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 SCNM1Q9BWG6 230 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 TRAV8-7A0A075B6U6 113 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 RBKSQ9H477 322 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
TRIM13-202ENST00000378182 CD99P14209 185 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 P2RY6Q15077 328 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 ABHD17AQ96GS6 310 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 GPR61Q9BZJ8 451 aa12.16□□□□□ -0.46
TRIM13-202ENST00000378182 OPN4Q9UHM6 478 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms