RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ZNF841Q6ZN19 808 aa10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 ZNF418Q8TF45 676 aaPredicted RBP10.38□□□□□ -0.75
PCDHA9-201ENST00000378122 CELA2AP08217 269 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 COMPP49747 757 aaPredicted RBP10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 MDP1Q86V88 176 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 GBGT1Q8N5D6 347 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 ZNF738Q8NE65 137 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 PRNDQ9UKY0 176 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 HIST1H1EP10412 219 aaKnown RBP10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 LTBRP36941 435 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 RPL30P62888 115 aaKnown RBP10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 PCOLCEQ15113 449 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 OR5A2Q8NGI9 324 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 OR52M1Q8NGK5 317 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 MYOZ3Q8TDC0 251 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 SLC25A38Q96DW6 304 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 DDA1Q9BW61 102 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 TTTY12Q9BZ98 90 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 RBKSQ9H477 322 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 H0YL77 283 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 J3QT63 122 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 GNG7O60262 68 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 FSTP19883 344 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 OR4B1Q8NGF8 309 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 SMDT1Q9H4I9 107 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 ZFP30Q9Y2G7 519 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 NDUFB4O95168 129 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 HSPB1P04792 205 aaKnown RBP10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 SRSF9Q13242 221 aaKnown RBP eCLIP10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 GUCD1Q96NT3 240 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 DIRC2Q96SL1 478 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 FBLL1A6NHQ2 334 aaKnown RBP10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 H7C2G1 150 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 SYNGR1O43759 233 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 RECKO95980 971 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 VAX1Q5SQQ9 334 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 C3orf56Q8N813 242 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 VSTM2AQ8TAG5 236 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 AQP3Q92482 292 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 WFIKKN1Q96NZ8 548 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 DUX5Q96PT3 197 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 MS4A5Q9H3V2 200 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 ZNF665Q9H7R5 613 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 FOXJ2Q9P0K8 574 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 IGHV3-35A0A0C4DH35 117 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 SCTP09683 121 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 PLPPR5Q32ZL2 321 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 HARBI1Q96MB7 349 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 GGACTQ9BVM4 153 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 THYN1Q9P016 225 aa10.37□□□□□ -0.75
PCDHA9-201ENST00000378122 SCN4AP35499 1836 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 MPTX1A8MV57 137 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 ZP4Q12836 540 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 EIF4EBP2Q13542 120 aaPredicted RBP10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 C1orf53Q5VUE5 145 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 GPR61Q9BZJ8 451 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 DMRT1Q9Y5R6 373 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 TMEM210A6NLX4 147 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 IGHV3-23P01764 117 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 GAPDHP04406 335 aaKnown RBP10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 NGFRP08138 427 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 STAG3L2P0CL84 134 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 TP53RKQ96S44 253 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 TWIST1Q15672 202 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 LINC00469Q8N7U9 141 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 PARD6GQ9BYG4 376 aaPredicted RBP10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 RNF7Q9UBF6 113 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 PXMP4Q9Y6I8 212 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 C5orf67F2Z3F1 127 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 P2RY4P51582 365 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 MRPL18Q9H0U6 180 aaKnown RBP10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 HEXA-AS1Q9H8Q6 139 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 IGHV3-66A0A0C4DH42 116 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 UPK3AO75631 287 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 OR8I2Q8N0Y5 310 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 GLRX2Q9NS18 164 aa10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 MAP1BP46821 2468 aaKnown RBP10.36□□□□□ -0.75
PCDHA9-201ENST00000378122 CD74P04233 296 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 GAB4Q2WGN9 574 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 HOXD4P09016 255 aaPredicted RBP10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 LAIR2Q6ISS4 152 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 SELENOHQ8IZQ5 122 aaKnown RBP10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 FAM222BQ8WU58 562 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 HIST1H2BAQ96A08 127 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 CBLN4Q9NTU7 201 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 INSIG2Q9Y5U4 225 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 ZNF646O15015 1829 aaPredicted RBP10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 SBF2Q86WG5 1849 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 PIKFYVEQ9Y2I7 2098 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 OR2J1Q9GZK6 312 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 J3QR06 171 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 DNLZQ5SXM8 178 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 TPRX1Q8N7U7 411 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 DMRTA2Q96SC8 542 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 GPHA2Q96T91 129 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 GPR132Q9UNW8 380 aa10.35□□□□□ -0.75
PCDHA9-201ENST00000378122 DSPPQ9NZW4 1301 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms