RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TRAV1-1A0A0B4J248 108 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 SIAH2O43255 324 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 SYNGR1O43759 233 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 SMPD2O60906 423 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 RFESDQ8TAC1 157 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 ELOVL1Q9BW60 279 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 JOSD1Q15040 202 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-202ENST00000377865 INO80CQ6PI98 192 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-202ENST00000377865 CT55Q8WUE5 264 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 BCL2L2Q92843 193 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-202ENST00000377865 SFXN3Q9BWM7 321 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 CCL11P51671 97 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 MST1LQ2TV78 715 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 C11orf42Q8N5U0 333 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 RSPO3Q9BXY4 272 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-202ENST00000377865 IL36RNQ9UBH0 155 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 TCFL5Q9UL49 500 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 ANAPC10Q9UM13 185 aa7.52□□□□□ -1.21
PCDH9-202ENST00000377865 SHISA7A6NL88 538 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 CNIH1O95406 144 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 IGLV3-19P01714 112 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 CLPSP04118 112 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 HTR1DP28221 377 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 GNB1P62873 340 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 MRPS11P82912 194 aaKnown RBP7.51□□□□□ -1.21
PCDH9-202ENST00000377865 TMEM97Q5BJF2 176 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
PCDH9-202ENST00000377865 SPNS3Q6ZMD2 512 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 ZNF525Q8N782 197 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 OR2M7Q8NG81 312 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 ZCCHC14Q8WYQ9 949 aaKnown RBP7.51□□□□□ -1.21
PCDH9-202ENST00000377865 LYZL4Q96KX0 146 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 SRXN1Q9BYN0 137 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 LINC00470Q9BZP3 86 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 PRRC2BQ5JSZ5 2229 aaKnown RBP7.51□□□□□ -1.21
PCDH9-202ENST00000377865 TRBV24-1A0A075B6N3 115 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 IGKV1-9A0A0C4DH69 117 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 J3QW42 95 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 TCL1AP56279 114 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 ZNF488Q96MN9 340 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 SAP30LQ9HAJ7 183 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 CDC42EP3Q9UKI2 254 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 WIPI2Q9Y4P8 454 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 hADV38S2A0JD32 116 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 C17orf51A8MQB3 221 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 HBZP02008 142 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 FGF5P12034 268 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 CD82P27701 267 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 STPG1Q5TH74 334 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 MBD3L1Q8WWY6 194 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 IMMP2LQ96T52 175 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 FOXD3Q9UJU5 478 aaPredicted RBP7.51□□□□□ -1.21
PCDH9-202ENST00000377865 C10orf113Q5VZT2 155 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 TDHQ8IZJ6 230 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 OR4F17Q8NGA8 305 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 OR4X1Q8NH49 305 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 SPSB4Q96A44 273 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 PERPQ96FX8 193 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 HIF1ANQ9NWT6 349 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 A6NDN8 102 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 PRR19A6NJB7 356 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 CEACAM18A8MTB9 384 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 P01737 135 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 TNFRSF1AP19438 455 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 FBXW9Q5XUX1 488 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 SPRED2Q7Z698 418 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 WDR31Q8NA23 367 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 OR5P3Q8WZ94 311 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 FAM122AQ96E09 287 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 WFIKKN1Q96NZ8 548 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 C19orf24Q9BVV8 132 aa7.51□□□□□ -1.21
PCDH9-202ENST00000377865 KLF2Q9Y5W3 355 aaPredicted RBP7.51□□□□□ -1.21
PCDH9-202ENST00000377865 ZNF106Q9H2Y7 1883 aaKnown RBP7.5□□□□□ -1.21
PCDH9-202ENST00000377865 GNG10P50151 68 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 RIGQ13278 110 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 ACSM6Q6P461 480 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 MDP1Q86V88 176 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 OR1A1Q9P1Q5 309 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 OR51B2Q9Y5P1 312 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 NPBWR2P48146 333 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 RBPJQ06330 500 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 MRPL52Q86TS9 123 aaKnown RBP7.5□□□□□ -1.21
PCDH9-202ENST00000377865 OR2D3Q8NGH3 330 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 OR10S1Q8NGN2 331 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 SLC25A40Q8TBP6 338 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 NPCDR1Q9BY65 106 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 AURKAIP1Q9NWT8 199 aaPredicted RBP7.5□□□□□ -1.21
PCDH9-202ENST00000377865 PLXNB3Q9ULL4 1909 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 ARL14EPLP0DKL9 152 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 HIST3H3Q16695 136 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 LRRC10Q5BKY1 277 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 IBA57Q5T440 356 aaKnown RBP7.5□□□□□ -1.21
PCDH9-202ENST00000377865 SMRP1Q8NCR6 262 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 OR52L2PQ8NGH6 319 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 GTF3AQ92664 365 aaKnown RBP7.5□□□□□ -1.21
PCDH9-202ENST00000377865 C1QTNF5Q9BXJ0 243 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 IL36BQ9NZH7 164 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 COL4A4P53420 1690 aaPredicted RBP7.5□□□□□ -1.21
PCDH9-202ENST00000377865 A0A1W2PR77 199 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 CAMPP49913 170 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms