RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 TMEM164Q5U3C3 297 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 RPP25LQ8N5L8 163 aaKnown RBP9.79□□□□□ -0.84
SEC23B-204ENST00000377475 TMEM251Q8N6I4 163 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 OR2M7Q8NG81 312 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
SEC23B-204ENST00000377475 PARLQ9H300 379 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 SERTAD4Q9NUC0 356 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 PCNX2A6NKB5 2137 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 IGHV3OR15-7A0A075B7D8 119 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 H0Y980 276 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 PPIHO43447 177 aaKnown RBP9.79□□□□□ -0.84
SEC23B-204ENST00000377475 NDUFB4O95168 129 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 CTXN2P0C2S0 81 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 WNT5AP41221 380 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 TCL1AP56279 114 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 ZNF506Q5JVG8 444 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 HIST3H2BBQ8N257 126 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 M1APQ8TC57 530 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 TAF15Q92804 592 aaKnown RBP eCLIP9.79□□□□□ -0.84
SEC23B-204ENST00000377475 RAB24Q969Q5 203 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 TMEM56Q96MV1 263 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 IMMP2LQ96T52 175 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 ARRDC1-AS1Q9H2J1 176 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 SEBOXQ9HB31 216 aaPredicted RBP9.79□□□□□ -0.84
SEC23B-204ENST00000377475 CBLN4Q9NTU7 201 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 VAX2Q9UIW0 290 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 TMEM56-RWDD3S4R434 201 aa9.79□□□□□ -0.84
SEC23B-204ENST00000377475 INTS1Q8N201 2190 aaKnown RBP9.79□□□□□ -0.84
SEC23B-204ENST00000377475 LRP5LA4QPB2 252 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 IGKV1D-33P01593 117 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 IGKV1-33P01594 117 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 FGF5P12034 268 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 CCL11P51671 97 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 MEF2BQ02080 365 aaPredicted RBP9.78□□□□□ -0.84
SEC23B-204ENST00000377475 PRAMEF5Q5TYX0 476 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 SLC25A40Q8TBP6 338 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 WDYHV1Q96HA8 205 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 HIST1H2BLQ99880 126 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 DMRT1Q9Y5R6 373 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 C17orf98A8MV24 154 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 C11orf94C9JXX5 98 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 PTBP3O95758 552 aaKnown RBP9.78□□□□□ -0.84
SEC23B-204ENST00000377475 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 DUSP3P51452 185 aaPredicted RBP9.78□□□□□ -0.84
SEC23B-204ENST00000377475 UCP3P55916 312 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 ACSM6Q6P461 480 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 ODF3L1Q8IXM7 274 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 ZNF525Q8N782 197 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 SCCPDHQ8NBX0 429 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
SEC23B-204ENST00000377475 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
SEC23B-204ENST00000377475 GALMQ96C23 342 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 TTTY12Q9BZ98 90 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 EGLN1Q9GZT9 426 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 PLXNB1O43157 2135 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 COL6A6A6NMZ7 2263 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 CA11O75493 328 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 IGHV3-48P01763 117 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 RPL30P62888 115 aaKnown RBP9.78□□□□□ -0.84
SEC23B-204ENST00000377475 FAM90A2PQ658T7 463 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 LRTM2Q8N967 370 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 DTD1Q8TEA8 209 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 OR5P3Q8WZ94 311 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 TRIB1Q96RU8 372 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 LIN7CQ9NUP9 197 aaKnown RBP9.78□□□□□ -0.84
SEC23B-204ENST00000377475 FOXJ2Q9P0K8 574 aa9.78□□□□□ -0.84
SEC23B-204ENST00000377475 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.85
SEC23B-204ENST00000377475 SH2D1BO14796 132 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 CYB5R3P00387 301 aaPredicted RBP9.77□□□□□ -0.85
SEC23B-204ENST00000377475 ATP5G3P48201 142 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 MEOX1P50221 254 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 HIST1H3AP68431 136 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 PCSK4Q6UW60 755 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 H1FOOQ8IZA3 346 aaPredicted RBP9.77□□□□□ -0.85
SEC23B-204ENST00000377475 LYPD6BQ8NI32 183 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 WDR54Q9H977 334 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 CPAMD8Q8IZJ3 1885 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 ETV2O00321 342 aaPredicted RBP9.77□□□□□ -0.85
SEC23B-204ENST00000377475 GYPAP02724 150 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 FAM201AQ5SY85 155 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 OR5A2Q8NGI9 324 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 C14orf144Q96I85 54 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 RTL8AQ9BWD3 113 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.85
SEC23B-204ENST00000377475 PSPNO60542 156 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 NAPSAO96009 420 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 CASP6P55212 293 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 FOXO1Q12778 655 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 MSMO1Q15800 293 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 SLC35E3Q7Z769 313 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 HAPLN4Q86UW8 402 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 TGIF2LXQ8IUE1 241 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 ABHD12Q8N2K0 398 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 MISP3Q96FF7 219 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 SH3BGRL2Q9UJC5 107 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 PILRBQ9UKJ0 227 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 YLPM1P49750 1951 aaKnown RBP9.76□□□□□ -0.85
SEC23B-204ENST00000377475 A0A1B0GU03 582 aa9.76□□□□□ -0.85
SEC23B-204ENST00000377475 M0R1X1 148 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms