RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 FBLIM1Q8WUP2 373 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 FKBP11Q9NYL4 201 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 CD1AP06126 327 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 CTSDP07339 412 aaPredicted RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 FBP1P09467 338 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF14P17017 642 aaPredicted RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 USF1P22415 310 aaPredicted RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 RPL39P5Q59GN2 51 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A1Q86YD7 464 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 ADAD2Q8NCV1 583 aaKnown RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 OR51I2Q9H344 312 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 DPM3Q9P2X0 92 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 NCOA6Q14686 2063 aaPredicted RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF729A6NN14 1252 aaPredicted RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 DNASE2O00115 360 aaPredicted RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 COX7A2P2O60397 106 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 IGHV3-48P01763 117 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 VDAC1P21796 283 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 S100A11P31949 105 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 PXDC1Q5TGL8 231 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM122CQ6P4D5 195 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 IGFL2Q6UWQ7 119 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 EAF1Q96JC9 268 aaPredicted RBP7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 NPAP1Q9NZP6 1156 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 WSB1Q9Y6I7 421 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 TRIOO75962 3097 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 PRSS47A8MTI9 375 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC25A6P12236 298 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 FGF7P21781 194 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 BLOC1S1P78537 153 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 UNC119Q13432 240 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 BRD3OSQ6XYD6 125 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 OR10Z1Q8NGY1 313 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF835Q9Y2P0 537 aa7.13□□□□□ -1.27
CRNKL1-202ENST00000377340 RPS10-NUDT3A0A1W2PQS6 291 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM14DPA8MWL7 114 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 P2RY4P51582 365 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 CD200R1LQ6Q8B3 271 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 SAXO1Q8IYX7 474 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 TEX29Q8N6K0 151 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 METRNQ9UJH8 293 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 PCNX3Q9H6A9 2034 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 A0A0G2JK05 382 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 PGA5P0DJD9 388 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 MC5RP33032 325 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 KIR2DS2P43631 304 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 RPL27AP46776 148 aaKnown RBP7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 PPT1P50897 306 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 LYZP61626 148 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 RPS11P62280 158 aaKnown RBP eCLIP7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 OXA1LQ15070 435 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 Q5PR19 223 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 Q8NA96 180 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 OR1L8Q8NGR8 309 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 CORO2AQ92828 525 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 PTX4Q96A99 478 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 P2RX4Q99571 388 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 KCNIP2Q9NS61 270 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 SNRPGP15A8MWD9 76 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 CHST1O43916 411 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 IGKV3-15P01624 115 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 OR10J4P0C629 311 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 HOXA4Q00056 320 aaPredicted RBP7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 ASPHD2Q6ICH7 369 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 OVCH2Q7RTZ1 564 aa7.12□□□□□ -1.27
CRNKL1-202ENST00000377340 PQLC2LA1A4F0 135 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 F8VVB4 439 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 F8VWA3 439 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 F8W036 122 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 MGST1P10620 155 aaKnown RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 NPBWR1P48145 328 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 TFPI2P48307 235 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 NANPQ8TBE9 248 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 SAT2Q96F10 170 aaPredicted RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 WASHC3Q9Y3C0 194 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 XIRP2A4UGR9 3374 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 DOCK11Q5JSL3 2073 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 TRAV20A0A0B4J274 112 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 NUPL2O15504 423 aaKnown RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 SYNGR2O43760 224 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 DUS4LO95620 317 aaKnown RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 REG1AP05451 166 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 PLAC9Q5JTB6 97 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 LIAT1Q6ZQX7 453 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 OR5C1Q8NGR4 320 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 DKK4Q9UBT3 224 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 V9GYH0 126 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 PLXNB3Q9ULL4 1909 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 A0A1W2PRX2 142 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF503-AS2A6NEH8 195 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 GIPP09681 153 aaPredicted RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 CSN1S1P47710 185 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF79Q15937 498 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 PLPPR1Q8TBJ4 325 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 DTD1Q8TEA8 209 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 SSMEM1Q8WWF3 244 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF486Q96H40 463 aaPredicted RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A10PA6NDY2 464 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms