RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CT45A6P0DMU7 189 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 CT45A5P0DMU8 189 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 CT45A7P0DMV0 189 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 MC5RP33032 325 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 VEGFCP49767 419 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 GNB1P62873 340 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 HLA-DRB3P79483 266 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 ZNF660Q6AZW8 331 aaPredicted RBP16.35■□□□□ 0.21
VSX1-201ENST00000376707 GLDNQ6ZMI3 551 aaPredicted RBP16.35■□□□□ 0.21
VSX1-201ENST00000376707 OR56B1Q8NGI3 324 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 ABHD5Q8WTS1 349 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 ARHGAP5-AS1Q96IT6 56 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 ABHD14BQ96IU4 210 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 PECRQ9BY49 303 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 PARP12Q9H0J9 701 aaKnown RBP16.35■□□□□ 0.21
VSX1-201ENST00000376707 Q9N2K0 584 aa16.35■□□□□ 0.21
VSX1-201ENST00000376707 ZNF256Q9Y2P7 627 aaPredicted RBP16.35■□□□□ 0.21
VSX1-201ENST00000376707 A0A1W2PN81 502 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 HSPA12AO43301 675 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 MRPS14O60783 128 aaKnown RBP16.34■□□□□ 0.21
VSX1-201ENST00000376707 ZBTB25P24278 435 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 CHRNA7P36544 502 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 CEACAM6P40199 344 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 INSL3P51460 131 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 CX3CL1P78423 397 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 NDPQ00604 133 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 PLAC9Q5JTB6 97 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 ASPHD1Q5U4P2 390 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 EDARADDQ8WWZ3 215 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 PTX4Q96A99 478 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 OR1A1Q9P1Q5 309 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 FOXA2Q9Y261 457 aaPredicted RBP16.34■□□□□ 0.21
VSX1-201ENST00000376707 WASHC3Q9Y3C0 194 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 FBXO7Q9Y3I1 522 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 A3GALT2U3KPV4 340 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 DNAH9Q9NYC9 4486 aa16.34■□□□□ 0.21
VSX1-201ENST00000376707 TMEM272A0A1B0GTI8 110 aa16.33■□□□□ 0.2
VSX1-201ENST00000376707 H0YJW9 148 aa16.33■□□□□ 0.2
VSX1-201ENST00000376707 DENRO43583 198 aaKnown RBP16.33■□□□□ 0.2
VSX1-201ENST00000376707 RBBP9O75884 186 aa16.33■□□□□ 0.2
VSX1-201ENST00000376707 LY86O95711 162 aa16.33■□□□□ 0.2
VSX1-201ENST00000376707 GABARAPL2P60520 117 aa16.33■□□□□ 0.2
VSX1-201ENST00000376707 TCTEX1D1Q8N7M0 179 aa16.33■□□□□ 0.2
VSX1-201ENST00000376707 CMSS1Q9BQ75 279 aaKnown RBP16.33■□□□□ 0.2
VSX1-201ENST00000376707 C11orf54Q9H0W9 315 aaPredicted RBP16.33■□□□□ 0.2
VSX1-201ENST00000376707 RAB22AQ9UL26 194 aa16.33■□□□□ 0.2
VSX1-201ENST00000376707 TRDV1A0A1B0GX56 115 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 SHISA3A0PJX4 238 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 PDCD5O14737 125 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 SCTP09683 121 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 GALP22466 123 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 CRIP2P52943 208 aaPredicted RBP16.32■□□□□ 0.2
VSX1-201ENST00000376707 TMEM267Q0VDI3 215 aaPredicted RBP16.32■□□□□ 0.2
VSX1-201ENST00000376707 PLA2G7Q13093 441 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 HES5Q5TA89 166 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 OR5AN1Q8NGI8 311 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 RNF150Q9ULK6 438 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 KCNK7Q9Y2U2 307 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 U3KQK5 164 aa16.32■□□□□ 0.2
VSX1-201ENST00000376707 IFITM5A6NNB3 132 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 FCN1O00602 326 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 OVOL1O14753 267 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 SOX15O60248 233 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 ATP6V1G2O95670 118 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 OR10A3P58181 314 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 C19orf54Q5BKX5 351 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 CASTOR1Q8WTX7 329 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 DCUN1D4Q92564 292 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 RNF5Q99942 180 aa16.31■□□□□ 0.2
VSX1-201ENST00000376707 ALX4Q9H161 411 aaPredicted RBP16.31■□□□□ 0.2
VSX1-201ENST00000376707 IGKV1-6A0A0C4DH72 117 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 TRDCB7Z8K6 153 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 UBE2UQ5VVX9 321 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 ZNF429Q86V71 674 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 PPP1R27Q86WC6 154 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 DRAXINQ8NBI3 349 aaPredicted RBP16.3■□□□□ 0.2
VSX1-201ENST00000376707 CLCC1Q96S66 551 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 METTL1Q9UBP6 276 aaKnown RBP16.3■□□□□ 0.2
VSX1-201ENST00000376707 ZNF221Q9UK13 617 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 NUBP2Q9Y5Y2 271 aa16.3■□□□□ 0.2
VSX1-201ENST00000376707 LINC01619G3V211 115 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 PROP1O75360 226 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 LGALS1P09382 135 aaKnown RBP16.29■□□□□ 0.2
VSX1-201ENST00000376707 EGR2P11161 476 aaPredicted RBP16.29■□□□□ 0.2
VSX1-201ENST00000376707 RAB6AP20340 208 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 MYL9P24844 172 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 ACTBL2Q562R1 376 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 PYHIN1Q6K0P9 492 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 UNQ5815/PRO19632Q6UWF5 114 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 RAB3CQ96E17 227 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 ASCL2Q99929 193 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 FAM103A1Q9BTL3 118 aaKnown RBP16.29■□□□□ 0.2
VSX1-201ENST00000376707 TOLLIPQ9H0E2 274 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 GAB2Q9UQC2 676 aa16.29■□□□□ 0.2
VSX1-201ENST00000376707 SAP30O75446 220 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 RAB3BP20337 219 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 CD40LGP29965 261 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 SLURP1P55000 103 aa16.28■□□□□ 0.2
VSX1-201ENST00000376707 RPS16P62249 146 aaKnown RBP16.28■□□□□ 0.2
VSX1-201ENST00000376707 PSG5Q15238 335 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms