RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CD37P11049 281 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 CEACAM6P40199 344 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 TAGLNQ01995 201 aaKnown RBP11.43□□□□□ -0.58
HDAC6-204ENST00000376643 UNC119Q13432 240 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 C19orf54Q5BKX5 351 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 ASPHD1Q5U4P2 390 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 OR10K2Q6IF99 312 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 UNQ5815/PRO19632Q6UWF5 114 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 PTX4Q96A99 478 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 RITA1Q96K30 269 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 TMEM68Q96MH6 324 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 METTL1Q9UBP6 276 aaKnown RBP11.43□□□□□ -0.58
HDAC6-204ENST00000376643 TPRKBQ9Y3C4 175 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 NUBP2Q9Y5Y2 271 aa11.43□□□□□ -0.58
HDAC6-204ENST00000376643 A0A0G2JLM5 398 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 PTGES3LE9PB15 166 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 SLC17A2O00624 439 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 GP9P14770 177 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 ZP3P21754 424 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 TPPP2P59282 170 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 RAB11BQ15907 218 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 RPL39P5Q59GN2 51 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 LAIR2Q6ISS4 152 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 ACSM6Q6P461 480 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 OR56B1Q8NGI3 324 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 ARPC1AQ92747 370 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 DLX4Q92988 240 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-204ENST00000376643 CMSS1Q9BQ75 279 aaKnown RBP11.42□□□□□ -0.58
HDAC6-204ENST00000376643 NICN1Q9BSH3 213 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 A3GALT2U3KPV4 340 aa11.42□□□□□ -0.58
HDAC6-204ENST00000376643 NBEAL2Q6ZNJ1 2754 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 DIRAS3O95661 229 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 RPS16P62249 146 aaKnown RBP11.41□□□□□ -0.58
HDAC6-204ENST00000376643 QRFPP83859 136 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 NDPQ00604 133 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 FAM89BQ8N5H3 189 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 ABHD14BQ96IU4 210 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 ASCL2Q99929 193 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 AGMATQ9BSE5 352 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 C11orf54Q9H0W9 315 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-204ENST00000376643 LPAR5Q9H1C0 372 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 RANGRFQ9HD47 186 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-204ENST00000376643 Q9N2K0 584 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 AK3Q9UIJ7 227 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 STUB1Q9UNE7 303 aa11.41□□□□□ -0.58
HDAC6-204ENST00000376643 C13orf42A0A1B0GVH6 325 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 LGALS7P47929 136 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 SLURP1P55000 103 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 INSL4Q14641 139 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 PSG5Q15238 335 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 P2RY14Q15391 338 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 LIPKQ5VXJ0 399 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 GLDNQ6ZMI3 551 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-204ENST00000376643 OR4A4PQ8NGN8 299 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 RCHY1Q96PM5 261 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 LSM2Q9Y333 95 aaKnown RBP11.4□□□□□ -0.58
HDAC6-204ENST00000376643 SORL1Q92673 2214 aa11.4□□□□□ -0.58
HDAC6-204ENST00000376643 IGHV4OR15-8A0A075B7B6 117 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 A0A087WW49 117 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 TRDCB7Z8K6 153 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 SOX15O60248 233 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 CNIH1O95406 144 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 CA2P00918 260 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 TRGV3P03979 118 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 RRASP10301 218 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 SPNP16150 400 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 AADACP22760 399 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 TPBGQ13641 420 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 FXYD3Q14802 87 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 TATDN3Q17R31 274 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 ANKRD13BQ86YJ7 626 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 SGPP2Q8IWX5 399 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 POC5Q8NA72 575 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 LFNGQ8NES3 379 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 MUC7Q8TAX7 377 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 RHOVQ96L33 236 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 ACOT13Q9NPJ3 140 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 ZNF355PQ9NSJ1 428 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 GAB2Q9UQC2 676 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 FBXO7Q9Y3I1 522 aa11.39□□□□□ -0.59
HDAC6-204ENST00000376643 KMT2CQ8NEZ4 4911 aaKnown RBP11.39□□□□□ -0.59
HDAC6-204ENST00000376643 DNAH9Q9NYC9 4486 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 ANKRD65E5RJM6 399 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 PDCD5O14737 125 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 SOCS1O15524 211 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 BRI3O95415 125 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 CD3GP09693 182 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 HSMCR30P0CW71 290 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 GADD45AP24522 165 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 MLLT11Q13015 90 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-204ENST00000376643 ARL6IP1Q15041 203 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 RTL8BQ17RB0 113 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 GRPEL2Q8TAA5 225 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 TMEM203Q969S6 136 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 CLCC1Q96S66 551 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 ALX4Q9H161 411 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-204ENST00000376643 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 RDH8Q9NYR8 311 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 OR1A1Q9P1Q5 309 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms