RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 HTD2P86397 168 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ZNF90Q03938 601 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ARL16Q0P5N6 197 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 REPIN1Q9BWE0 567 aaKnown RBP12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 FOXJ2Q9P0K8 574 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 IGLV3-32A0A0A0MS00 114 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ZNF503-AS2A6NEH8 195 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 HAND1O96004 215 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 KITLGP21583 273 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TAF15Q92804 592 aaKnown RBP eCLIP12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TRAV24A0A0B4J272 114 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 NDUFB4O95168 129 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 LYL1P12980 280 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 CD33P20138 364 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 GLIPR1P48060 266 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 STARD6P59095 220 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TFF3Q07654 80 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 OR8B8Q15620 311 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 RAB24Q969Q5 203 aa12.21□□□□□ -0.45
TNFRSF1B-201ENST00000376259 A0A1B0GU03 582 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 J3QT63 122 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 MPLP40238 635 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CDC34P49427 236 aaPredicted RBP12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SPSB3Q6PJ21 355 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ZDHHC11Q9H8X9 412 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CA11O75493 328 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 NTF3P20783 257 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 SOX8P57073 446 aa12.21□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TMEM30CPA0ZSE6 113 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 GRIFINA4D1Z8 144 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 OR7C2O60412 319 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 UCP3P55916 312 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TECTBQ96PL2 329 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 HIPK2Q9H2X6 1198 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TRAPPC1Q9Y5R8 145 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 OR5B21A6NL26 309 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 C1QTNF9BB2RNN3 333 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 C17orf112F2Z3M2 114 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 IGHV3-48P01763 117 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ZNF83P51522 516 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ID3Q02535 119 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 MRGPRGQ86SM5 289 aa12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF1B-201ENST00000376259 HBZP02008 142 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PRR31Q5SQ13 230 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 FAM201AQ5SY85 155 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 RIPPLY2Q5TAB7 128 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 OR2T10Q8NGZ9 312 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LRRC29Q8WV35 223 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ATG101Q9BSB4 218 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PARLQ9H300 379 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 MPC1Q9Y5U8 109 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CREBBPQ92793 2442 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 APELAP0DMC3 54 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 KLF13Q9Y2Y9 288 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 C17orf98A8MV24 154 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 GYPAP02724 150 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 HOXA5P20719 270 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PRR27Q6MZM9 219 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TAAR9Q96RI9 348 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CDX2Q99626 313 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 NAT8Q9UHE5 227 aa12.19□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TOX4O94842 621 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 NDUFB7P17568 137 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 C10orf91Q5T1B1 145 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ACSM6Q6P461 480 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ABHD12Q8N2K0 398 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 C1QTNF5Q9BXJ0 243 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PRDM14Q9GZV8 571 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TUBA4BQ9H853 241 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TRAV34A0A0B4J273 112 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LY6G6EA0A0G2JKS1 128 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 F6UZH7 168 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CYB5R3P00387 301 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ZNF766Q5HY98 468 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 CRIP3Q6Q6R5 217 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 U3KQA8 63 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 YLPM1P49750 1951 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ZNF506Q5JVG8 444 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 LYG1Q8N1E2 194 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 RYDENQ9NUL5 291 aaKnown RBP12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ANAPC10Q9UM13 185 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 NOTCH3Q9UM47 2321 aa12.18□□□□□ -0.46
TNFRSF1B-201ENST00000376259 M0R1B8 84 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 COL10A1Q03692 680 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 ACOT6Q3I5F7 207 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 FBXW9Q5XUX1 488 aa12.17□□□□□ -0.46
TNFRSF1B-201ENST00000376259 C1orf210Q8IVY1 113 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms