RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 KLHDC1Q8N7A1 406 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 OR8B12Q8NGG6 310 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 SSC4DQ8WTU2 575 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 STARD4Q96DR4 205 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 ZDHHC11Q9H8X9 412 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 SLC39A9Q9NUM3 307 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 ST3GAL6Q9Y274 331 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 POLR1DQ9Y2S0 133 aa10.37□□□□□ -0.75
C9orf3-203ENST00000375315 LOC102723996A0A087X1L8 192 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 IGKV1-9A0A0C4DH69 117 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 GRIFINA4D1Z8 144 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 RNF212BA8MTL3 300 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 SLC33A1O00400 549 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-203ENST00000375315 IGLC2P0DOY2 106 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 IGLC3P0DOY3 106 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 TNFSF4P23510 183 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 ADMP35318 185 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 NPBWR2P48146 333 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 CCL11P51671 97 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 A0A1W2PQD3 144 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 HYPMO75409 117 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 CTRLP40313 264 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 DAP3P51398 398 aaKnown RBP10.36□□□□□ -0.75
C9orf3-203ENST00000375315 MYBPHQ13203 477 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 TESK1Q15569 626 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 ABHD17BQ5VST6 288 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 RNF24Q9Y225 148 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 DSPP15924 2871 aaKnown RBP10.36□□□□□ -0.75
C9orf3-203ENST00000375315 ANKRD11Q6UB99 2663 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-203ENST00000375315 SERF1AO75920 110 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 CRISP2P16562 243 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 MLF1P58340 268 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 RPS20P60866 119 aaKnown RBP10.36□□□□□ -0.75
C9orf3-203ENST00000375315 KRTDAPP60985 99 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 VAMP3Q15836 100 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 WIPI1Q5MNZ9 446 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-203ENST00000375315 LDLRAD2Q5SZI1 272 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 SIGLECL1Q8N7X8 197 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 OR56B2PQ8NGI1 322 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 SIGLEC12Q96PQ1 595 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
C9orf3-203ENST00000375315 SLC35D1Q9NTN3 355 aa10.36□□□□□ -0.75
C9orf3-203ENST00000375315 COMPP49747 757 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-203ENST00000375315 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-203ENST00000375315 ZNF121P58317 390 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-203ENST00000375315 DMRTC1Q5HYR2 192 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 TMEM144Q7Z5S9 345 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 BAGE3Q86Y29 109 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 WDFY1Q8IWB7 410 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 OR2M3Q8NG83 312 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 OR4F5Q8NH21 305 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 PLPPR1Q8TBJ4 325 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 ASB10Q8WXI3 467 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 SMIM12Q96EX1 92 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 TMEM56Q96MV1 263 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 OR4F4Q96R69 305 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 TMEM56-RWDD3S4R434 201 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 ZNF814B7Z6K7 855 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 FCGR2AP12318 317 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 CD99P14209 185 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 CYB561P49447 251 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 ZNF703Q9H7S9 590 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-203ENST00000375315 DEPPQ9NTK1 212 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 ATMQ13315 3056 aa10.35□□□□□ -0.75
C9orf3-203ENST00000375315 IGKV1D-43A0A0B4J1Z2 117 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 PINLYPA6NC86 204 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 HS3ST1O14792 307 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 NXPH3O95157 252 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 LIFP15018 202 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 ZNF17P17021 662 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 GDF1P27539 372 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 PLPPR5Q32ZL2 321 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 SELENOHQ8IZQ5 122 aaKnown RBP10.34□□□□□ -0.75
C9orf3-203ENST00000375315 TCTEX1D1Q8N7M0 179 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 DYRK2Q92630 601 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 KCNK17Q96T54 332 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 ALKBH4Q9NXW9 302 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 TRAV34A0A0B4J273 112 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 SERPINA7P05543 415 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 CCL1P22362 96 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 YPEL3P61236 119 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-203ENST00000375315 FOXL1Q12952 345 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 Q6ZVH6 145 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 PIP4P1Q86T03 277 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 Q96M66 194 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 UCN2Q96RP3 112 aa10.34□□□□□ -0.75
C9orf3-203ENST00000375315 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
C9orf3-203ENST00000375315 CELA3AP09093 270 aa10.33□□□□□ -0.76
C9orf3-203ENST00000375315 WT1P19544 449 aaPredicted RBP10.33□□□□□ -0.76
C9orf3-203ENST00000375315 VDAC1P21796 283 aa10.33□□□□□ -0.76
C9orf3-203ENST00000375315 BIDP55957 195 aa10.33□□□□□ -0.76
C9orf3-203ENST00000375315 PSMF1Q92530 271 aa10.33□□□□□ -0.76
C9orf3-203ENST00000375315 CDC42EP3Q9UKI2 254 aa10.33□□□□□ -0.76
C9orf3-203ENST00000375315 H3BP45 60 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms