RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 CDIPTO14735 213 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 WNT9BO14905 357 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 AGFG2O95081 481 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 CDS2O95674 445 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 SP1P08047 785 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 SP9P0CG40 484 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 IAPPP10997 89 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 IDH3GP51553 393 aaPredicted RBP5.38□□□□□ -1.55
CHD6-202ENST00000373222 RPL15P61313 204 aaKnown RBP5.38□□□□□ -1.55
CHD6-202ENST00000373222 PEA15Q15121 130 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 RBMS3Q6XE24 437 aaKnown RBP5.38□□□□□ -1.55
CHD6-202ENST00000373222 MKXQ8IYA7 352 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 TPRX1Q8N7U7 411 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 CCDC54Q8NEL0 328 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 OR2G3Q8NGZ4 309 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 CD300LFQ8TDQ1 290 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 WDYHV1Q96HA8 205 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 LINC00470Q9BZP3 86 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 VSIRQ9H7M9 311 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 B4GALT7Q9UBV7 327 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 MRPS18CQ9Y3D5 142 aaKnown RBP5.38□□□□□ -1.55
CHD6-202ENST00000373222 TMED3Q9Y3Q3 217 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 APC2O95996 2303 aa5.38□□□□□ -1.55
CHD6-202ENST00000373222 ZNF727A8MUV8 499 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 AHRRA9YTQ3 701 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 UMAD1C9J7I0 102 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 K7N7A8 449 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 SEC11BP0C7V7 166 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 LMO1P25800 156 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 SNRPEP62304 92 aaKnown RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 FLI1Q01543 452 aaPredicted RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 RBPJQ06330 500 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 ARL16Q0P5N6 197 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 IL13RA2Q14627 380 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 GNMTQ14749 295 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 ZNF324BQ6AW86 544 aaPredicted RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 EIF5AL1Q6IS14 154 aaKnown RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 SPSB3Q6PJ21 355 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 SSX7Q7RTT5 188 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 WFDC8Q8IUA0 241 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 FAM58AQ8N1B3 248 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 FAM24BQ8N5W8 94 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 CCDC71LQ8N9Z2 235 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 MDS2Q8NDY4 140 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 HIST1H2BAQ96A08 127 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 TMEM56Q96MV1 263 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 RSG1Q9BU20 258 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 DDA1Q9BW61 102 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 OR14J1Q9UGF5 321 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 RNF150Q9ULK6 438 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 RNF115Q9Y4L5 304 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 PUS1Q9Y606 427 aaKnown RBP eCLIP5.37□□□□□ -1.55
CHD6-202ENST00000373222 TMEM56-RWDD3S4R434 201 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 TLN1Q9Y490 2541 aaKnown RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 MUC6Q6W4X9 2439 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 CGB1A6NKQ9 187 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 KIAA1324LA8MWY0 1029 aaPredicted RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 WDR1O75083 606 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 OR2H2O95918 312 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 WT1P19544 449 aaPredicted RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 COL8A2P25067 703 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 MPV17P39210 176 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 OR2B8PP59922 312 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 AVPI1Q5T686 147 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 Q6P435 159 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 Q6ZR03 302 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 C8orf86Q6ZUL3 223 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 SCCPDHQ8NBX0 429 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 MBD3L2Q8NHZ7 208 aaPredicted RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 GPR146Q96CH1 333 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 OR51I2Q9H344 312 aa5.37□□□□□ -1.55
CHD6-202ENST00000373222 LYRM2Q9NU23 88 aaPredicted RBP5.37□□□□□ -1.55
CHD6-202ENST00000373222 BORCS7-ASMTA0A0B4J1R7 106 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 ANKRD30BLA7E2S9 258 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 K7EQM0 130 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 NKX2-8O15522 239 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 PSPNO60542 156 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 IGKV1-5P01602 117 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 DEFA4P12838 97 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 EDN2P20800 178 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 TUBG1P23258 451 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 F2RP25116 425 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 UCP1P25874 307 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 APLNRP35414 380 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 EIF5AP63241 154 aaKnown RBP5.36□□□□□ -1.55
CHD6-202ENST00000373222 PLP2Q04941 152 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 SLC10A1Q14973 349 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 GPR157Q5UAW9 335 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 ZNF343Q6P1L6 599 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 OR5A2Q8NGI9 324 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 OR10J5Q8NHC4 309 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 HIST1H2AAQ96QV6 131 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 C12orf57Q99622 126 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 VKORC1Q9BQB6 163 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 BCL2L14Q9BZR8 327 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 TUBG2Q9NRH3 451 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 TINAGQ9UJW2 476 aa5.36□□□□□ -1.55
CHD6-202ENST00000373222 KCNS2Q9ULS6 477 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms