RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CD300LFQ8TDQ1 290 aa21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 ZFP57Q9NU63 452 aa21.58■■□□□ 1.05
ATPAF1-202ENST00000371937 L7N2F9 121 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 M0R1X1 148 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 PROP1O75360 226 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 IGHV4-39P01824 125 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 ERVFRD-1P60508 538 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 RAB32Q13637 225 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 SPAG16Q8N0X2 631 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 LYG1Q8N1E2 194 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 C8orf31Q8N9H6 132 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 SSBP3Q9BWW4 388 aaPredicted RBP21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 MBD2Q9UBB5 411 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 MALRD1Q5VYJ5 2156 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 LINC00473A8K010 186 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 RBP4P02753 201 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 IGHV1-8P0DP01 117 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 LPAR6P43657 344 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 RPL39P5Q59GN2 51 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 THOC7Q6I9Y2 204 aaKnown RBP21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 PRSS54Q6PEW0 395 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 ZNF525Q8N782 197 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 LSM10Q969L4 123 aaKnown RBP21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 NARFLQ9H6Q4 476 aa21.57■■□□□ 1.04
ATPAF1-202ENST00000371937 A0A087X0M5 115 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 SAA2-SAA4A0A096LPE2 208 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 A0A1B0GX30 115 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 ATG12O94817 140 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 IGKV1-39P01597 117 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 IGKV1D-39P04432 117 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 SAA2P0DJI9 122 aaPredicted RBP21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 CXCL2P19875 107 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 S100A10P60903 97 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 LY6G5BQ8NDX9 201 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 RNASE11Q8TAA1 199 aaKnown RBP21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 S1PR3Q99500 378 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 GON7Q9BXV9 100 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 MFFQ9GZY8 342 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 SESN1Q9Y6P5 492 aa21.56■■□□□ 1.04
ATPAF1-202ENST00000371937 hCG_1809904A0A1W2PP81 198 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 A0A1W2PPE2 198 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 A0A1W2PR64 198 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 A0A1W2PRV1 198 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 RLN2P04090 185 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 LIPFP07098 398 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 PDLIM4P50479 330 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 SMCO1Q147U7 214 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 ODF3L1Q8IXM7 274 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 C11orf42Q8N5U0 333 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 RRNAD1Q96FB5 475 aaKnown RBP21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 RNF126Q9BV68 326 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 TNFSF18Q9UNG2 199 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 PRELID3BQ9Y3B1 194 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 AKAP6Q13023 2319 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 RAMP3O60896 148 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 SLC25A6P12236 298 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 LYL1P12980 280 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 PLA2G2AP14555 144 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 AKR1C2P52895 323 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 OR2B11Q5JQS5 317 aa21.55■■□□□ 1.04
ATPAF1-202ENST00000371937 J3QKU1 62 aa21.54■■□□□ 1.04
ATPAF1-202ENST00000371937 SSTR2P30874 369 aa21.54■■□□□ 1.04
ATPAF1-202ENST00000371937 INO80EQ8NBZ0 244 aaPredicted RBP21.54■■□□□ 1.04
ATPAF1-202ENST00000371937 OR4D5Q8NGN0 318 aa21.54■■□□□ 1.04
ATPAF1-202ENST00000371937 ADTRPQ96IZ2 230 aa21.54■■□□□ 1.04
ATPAF1-202ENST00000371937 BARX1Q9HBU1 254 aaPredicted RBP21.54■■□□□ 1.04
ATPAF1-202ENST00000371937 A0A1B0GU03 582 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 H0YIZ8 118 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 SCGB1D2O95969 90 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 KIR2DS2P43631 304 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 BRWD1-AS2P59051 145 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 NCR3LG1Q68D85 454 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 LINC00311Q8N616 119 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 ZNF596Q8TC21 504 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 DCUN1D4Q92564 292 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 ZNF251Q9BRH9 671 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 TMEM133Q9H2Q1 129 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 SLA2Q9H6Q3 261 aa21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 UTP20O75691 2785 aaKnown RBP21.53■■□□□ 1.04
ATPAF1-202ENST00000371937 LOC105371242A0A075B767 164 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 MBPP02686 304 aaPredicted RBP21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 OR9G1Q8NH87 305 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 A0A0D9SG52 128 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 J3QR06 171 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 ST8SIA3O43173 380 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 RBFOX2O43251 390 aaKnown RBP eCLIP21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 OR2F2O95006 317 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 S100A11P31949 105 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 THBS3P49746 956 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 IFITM2Q01629 132 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 ZNF816Q0VGE8 651 aaPredicted RBP21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 OR2F1Q13607 317 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 ZNF345Q14585 488 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 ACOT7LQ6ZUV0 252 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 FOXRED2Q8IWF2 684 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 GPR146Q96CH1 333 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 BPESC1Q9GZL8 116 aa21.52■■□□□ 1.04
ATPAF1-202ENST00000371937 C22orf46C9J442 243 aa21.51■■□□□ 1.03
ATPAF1-202ENST00000371937 DEDDO75618 318 aa21.51■■□□□ 1.03
ATPAF1-202ENST00000371937 IGKV1-5P01602 117 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms