RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CXCL3P19876 107 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 GHITMQ9H3K2 345 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 HIGD1AQ9Y241 93 aa12.61□□□□□ -0.39
NDC1-201ENST00000371429 C11orf94C9JXX5 98 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 LHX2P50458 406 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 CLDN18P56856 261 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 SPCS3P61009 180 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 ZNF79Q15937 498 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 ERVS71-1P61550 626 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 NHLRC2Q8NBF2 726 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 TMEM186Q96B77 213 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 ARHGEF17Q96PE2 2063 aaPredicted RBP12.6□□□□□ -0.39
NDC1-201ENST00000371429 LCTP09848 1927 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 CEACAM18A8MTB9 384 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 FAM157CP0CG43 387 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 NRN1LQ496H8 165 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 FDX2Q6P4F2 183 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 Q96M66 194 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 NEURL2Q9BR09 285 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 NPVFQ9HCQ7 196 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 DEPPQ9NTK1 212 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 YTHDF2Q9Y5A9 579 aaKnown RBP12.6□□□□□ -0.39
NDC1-201ENST00000371429 CAMPP49913 170 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 AANATQ16613 207 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 TMEM30BQ3MIR4 351 aa12.6□□□□□ -0.39
NDC1-201ENST00000371429 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
NDC1-201ENST00000371429 DIDO1Q9BTC0 2240 aaKnown RBP12.59□□□□□ -0.39
NDC1-201ENST00000371429 PIN1P1O15428 100 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 CD1BP29016 333 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 TRAPPC1Q9Y5R8 145 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 WNT9BO14905 357 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 COL8A1P27658 744 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 WNT5AP41221 380 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 ARL2-SNX15V9GYD0 113 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 RBFOX3A6NFN3 312 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 NEURL1O76050 574 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 LINC00271P0C7V0 271 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 SLC35E3Q7Z769 313 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 ALX4Q9H161 411 aaPredicted RBP12.59□□□□□ -0.39
NDC1-201ENST00000371429 THADAQ6YHU6 1953 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 A0A1W2PS18 150 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 E9PLN8 166 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 VKORC1Q9BQB6 163 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 TMEM222Q9H0R3 208 aa12.59□□□□□ -0.39
NDC1-201ENST00000371429 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 IGKV1D-43A0A0B4J1Z2 117 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 LCN2P80188 198 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 CENPVQ7Z7K6 275 aaPredicted RBP12.58□□□□□ -0.4
NDC1-201ENST00000371429 PRSS3P2Q8NHM4 247 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 TMEM18Q96B42 140 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 TBR1Q16650 682 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 MESP1Q9BRJ9 268 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 PPP1R3EQ9H7J1 279 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 OVCH2Q7RTZ1 564 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 OR4C13Q8NGP0 309 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 AQP3Q92482 292 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 EAF1Q96JC9 268 aaPredicted RBP12.58□□□□□ -0.4
NDC1-201ENST00000371429 hCG_38984A0A1B0GV85 526 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 TGFAP01135 160 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 OR10J1P30954 320 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 DEFA6Q01524 100 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 KHDC3LQ587J8 217 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 UNQ6494/PRO21346Q6UXR6 183 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 C17orf82Q86X59 251 aaPredicted RBP12.58□□□□□ -0.4
NDC1-201ENST00000371429 TMEM37Q8WXS4 190 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 POM121Q96HA1 1249 aa12.58□□□□□ -0.4
NDC1-201ENST00000371429 PGLYRP1O75594 196 aaPredicted RBP12.57□□□□□ -0.4
NDC1-201ENST00000371429 USF1P22415 310 aaPredicted RBP12.57□□□□□ -0.4
NDC1-201ENST00000371429 AMTP48728 403 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 ZNF837Q96EG3 531 aaPredicted RBP12.57□□□□□ -0.4
NDC1-201ENST00000371429 METTL26Q96S19 204 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 OR2T8A6NH00 312 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 CDKN1AP38936 164 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 PSG7Q13046 419 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 EBLN2Q6P2I7 272 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 DICER1Q9UPY3 1922 aaKnown RBP12.57□□□□□ -0.4
NDC1-201ENST00000371429 RALGAPA2Q2PPJ7 1873 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 OR2A4O95047 310 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 P01737 135 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 SSTR5P35346 364 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 RPEL1Q2QD12 228 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 OR2A7Q96R45 310 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 SSBP3Q9BWW4 388 aaPredicted RBP12.57□□□□□ -0.4
NDC1-201ENST00000371429 IGSF23A1L1A6 192 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 FABP4P15090 132 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 PPOXP50336 477 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 SELENOTP62341 195 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 FAM201AQ5SY85 155 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 CD200R1LQ6Q8B3 271 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 GPR132Q9UNW8 380 aa12.57□□□□□ -0.4
NDC1-201ENST00000371429 MTCL1Q9Y4B5 1905 aaKnown RBP12.57□□□□□ -0.4
NDC1-201ENST00000371429 FCN1O00602 326 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms