RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LIAT1Q6ZQX7 453 aa10.8□□□□□ -0.68
GPC3-201ENST00000370818 Q8IYB0 196 aa10.8□□□□□ -0.68
GPC3-201ENST00000370818 C18orf12Q96KH6 178 aa10.8□□□□□ -0.68
GPC3-201ENST00000370818 TP53RKQ96S44 253 aa10.8□□□□□ -0.68
GPC3-201ENST00000370818 FZR1Q9UM11 496 aa10.8□□□□□ -0.68
GPC3-201ENST00000370818 RCL1Q9Y2P8 373 aaKnown RBP10.8□□□□□ -0.68
GPC3-201ENST00000370818 SPTBN2O15020 2390 aa10.8□□□□□ -0.68
GPC3-201ENST00000370818 SLC33A1O00400 549 aaPredicted RBP10.79□□□□□ -0.68
GPC3-201ENST00000370818 ATXN7O15265 892 aaPredicted RBP10.79□□□□□ -0.68
GPC3-201ENST00000370818 MPPED1O15442 326 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 IFNA21P01568 189 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 OR4A8P0C604 315 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 ZNF146Q15072 292 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 Q6ZR03 302 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 C11orf53Q8IXP5 236 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 C1orf87Q8N0U7 546 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 CYB561D1Q8N8Q1 229 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 NIPSNAP3BQ9BS92 247 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 DMXL2Q8TDJ6 3036 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 TMEM210A6NLX4 147 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 E5RGE8 158 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 SIRPB1O00241 398 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 PHF1O43189 567 aaPredicted RBP10.79□□□□□ -0.68
GPC3-201ENST00000370818 SCAF4O95104 1147 aaKnown RBP10.79□□□□□ -0.68
GPC3-201ENST00000370818 DIRAS3O95661 229 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 CTXN2P0C2S0 81 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 KITLGP21583 273 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 RND2P52198 227 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 HOXA4Q00056 320 aaPredicted RBP10.79□□□□□ -0.68
GPC3-201ENST00000370818 ZNF818PQ6ZRF7 136 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 SLC35E3Q7Z769 313 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 SLC35G3Q8N808 338 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 CCDC71LQ8N9Z2 235 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 OR4X1Q8NH49 305 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 PLPPR1Q8TBJ4 325 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 ABHD14AQ9BUJ0 271 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 SSUH2Q9Y2M2 353 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 NSG2Q9Y328 171 aa10.79□□□□□ -0.68
GPC3-201ENST00000370818 ATMQ13315 3056 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 NXPH2O95156 264 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 FABP6P51161 128 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 C1orf185Q5T7R7 199 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 GAPTQ8N292 157 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 FAM169BQ8N8A8 192 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 OR1P1Q8NH06 330 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 RFNGQ9Y644 331 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 C3orf85A0A1B0GTC6 90 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 A6NNC1 897 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 C1QTNF9BB2RNN3 333 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 GPR137BO60478 399 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 SCGB1D2O95969 90 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 MBPP02686 304 aaPredicted RBP10.78□□□□□ -0.68
GPC3-201ENST00000370818 MDKP21741 143 aaPredicted RBP10.78□□□□□ -0.68
GPC3-201ENST00000370818 TUBG1P23258 451 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 HLA-DRB3P79483 266 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 PAX5Q02548 391 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 ICAM4Q14773 271 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 MBNL2Q5VZF2 373 aaKnown RBP10.78□□□□□ -0.68
GPC3-201ENST00000370818 SP5Q6BEB4 398 aaPredicted RBP10.78□□□□□ -0.68
GPC3-201ENST00000370818 TEX38Q6PEX7 206 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 ZNF826PQ6ZT77 177 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 LGI3Q8N145 548 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 GPHA2Q96T91 129 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 HES4Q9HCC6 221 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 TUBG2Q9NRH3 451 aa10.78□□□□□ -0.68
GPC3-201ENST00000370818 TRAV39A0A0B4J263 110 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 TIMM8AO60220 97 aaPredicted RBP10.77□□□□□ -0.68
GPC3-201ENST00000370818 TIMP3P35625 211 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 COA6Q5JTJ3 125 aaKnown RBP10.77□□□□□ -0.68
GPC3-201ENST00000370818 DMRTA1Q5VZB9 504 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 ZNF324BQ6AW86 544 aaPredicted RBP10.77□□□□□ -0.68
GPC3-201ENST00000370818 ZNF497Q6ZNH5 498 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 TBC1D26Q86UD7 250 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 FAM185AQ8N0U4 392 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 ABHD17AQ96GS6 310 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 CABLES2Q9BTV7 478 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 MSL2Q9HCI7 577 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 KIAA1456Q9P272 454 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 WSB1Q9Y6I7 421 aa10.77□□□□□ -0.68
GPC3-201ENST00000370818 APC2O95996 2303 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 TRBV24-1A0A075B6N3 115 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 B4DEV8 164 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 EPHA1P21709 976 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
GPC3-201ENST00000370818 CEBPDP49716 269 aaPredicted RBP10.77□□□□□ -0.69
GPC3-201ENST00000370818 MSMPQ1L6U9 139 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 SPIN3Q5JUX0 258 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 GPR157Q5UAW9 335 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 TMEM222Q9H0R3 208 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 CCL28Q9NRJ3 127 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 TMEM242Q9NWH2 141 aa10.77□□□□□ -0.69
GPC3-201ENST00000370818 ANKRD11Q6UB99 2663 aaPredicted RBP10.77□□□□□ -0.69
GPC3-201ENST00000370818 WNT9BO14905 357 aa10.76□□□□□ -0.69
GPC3-201ENST00000370818 HSPB1P04792 205 aaKnown RBP10.76□□□□□ -0.69
GPC3-201ENST00000370818 RPP30P78346 268 aaKnown RBP10.76□□□□□ -0.69
GPC3-201ENST00000370818 FOXC1Q12948 553 aa10.76□□□□□ -0.69
GPC3-201ENST00000370818 ZNF718Q3SXZ3 478 aa10.76□□□□□ -0.69
GPC3-201ENST00000370818 KRTCAP3Q53RY4 240 aa10.76□□□□□ -0.69
GPC3-201ENST00000370818 MEX3BQ6ZN04 569 aaKnown RBP10.76□□□□□ -0.69
GPC3-201ENST00000370818 OR52M1Q8NGK5 317 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms