RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ZNRF1Q8ND25 227 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 OR10D4PQ8NGN7 298 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 HS3ST6Q96QI5 342 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 TRAV24A0A0B4J272 114 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 AHRRA9YTQ3 701 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 C12orf77C9JDV5 145 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 DNASE2O00115 360 aaPredicted RBP7.18□□□□□ -1.26
PTPRK-206ENST00000368215 DVL1O14640 695 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 GYPAP02724 150 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 ADH4P08319 380 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 MMP9P14780 707 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 CFPP27918 469 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 ATP6V1FQ16864 119 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 ZNF66Q6ZN08 573 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 BAGE3Q86Y29 109 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 BAGE2Q86Y30 109 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 C9orf106Q8NAJ2 232 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 CYTL1Q9NRR1 136 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 RYDENQ9NUL5 291 aaKnown RBP7.18□□□□□ -1.26
PTPRK-206ENST00000368215 GAR1Q9NY12 217 aaKnown RBP7.18□□□□□ -1.26
PTPRK-206ENST00000368215 DOK5Q9P104 306 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 hADV38S2A0JD32 116 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 SPINK4O60575 86 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 FABP4P15090 132 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 HIST1H3AP68431 136 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 BSXQ3C1V8 233 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 ZNF645Q8N7E2 425 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 ZBTB34Q8NCN2 500 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 VAX2Q9UIW0 290 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 RFNGQ9Y644 331 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 ODAMA1E959 279 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 CSRP1P21291 193 aaKnown RBP7.18□□□□□ -1.26
PTPRK-206ENST00000368215 SUB1P53999 127 aaKnown RBP eCLIP7.18□□□□□ -1.26
PTPRK-206ENST00000368215 DEFA6Q01524 100 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 MOB3BQ86TA1 216 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 TOLLIPQ9H0E2 274 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 SAP30LQ9HAJ7 183 aa7.18□□□□□ -1.26
PTPRK-206ENST00000368215 LAMA3Q16787 3333 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 IGKV3D-15A0A087WSY6 115 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 MGST3O14880 152 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 GALR1P47211 349 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 MEOX2P50222 304 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 BATFQ16520 125 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 CORO2AQ92828 525 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 DAZAP1Q96EP5 407 aaKnown RBP7.17□□□□□ -1.26
PTPRK-206ENST00000368215 SMIM8Q96KF7 97 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 WFDC1Q9HC57 220 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 PLSCR2Q9NRY7 297 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 BPTFQ12830 3046 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 C11orf94C9JXX5 98 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 APELAP0DMC3 54 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 BCL2P10415 239 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 COX7A1P24310 79 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 PRR27Q6MZM9 219 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 DNM1P46Q6ZS02 220 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 GLRX5Q86SX6 157 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 EIF4E3Q8N5X7 224 aaKnown RBP7.17□□□□□ -1.26
PTPRK-206ENST00000368215 TAF15Q92804 592 aaKnown RBP eCLIP7.17□□□□□ -1.268e-7■□□□□ 10.9
PTPRK-206ENST00000368215 NEIL1Q96FI4 390 aaPredicted RBP7.17□□□□□ -1.26
PTPRK-206ENST00000368215 C18orf12Q96KH6 178 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 RPRMQ9NS64 109 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 DBX1A6NMT0 343 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 CYB5R3P00387 301 aaPredicted RBP7.17□□□□□ -1.26
PTPRK-206ENST00000368215 TNFRSF9Q07011 255 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 TIGITQ495A1 244 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 KHDC3LQ587J8 217 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 MRGPRGQ86SM5 289 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 H1FOOQ8IZA3 346 aaPredicted RBP7.17□□□□□ -1.26
PTPRK-206ENST00000368215 GINS3Q9BRX5 216 aa7.17□□□□□ -1.26
PTPRK-206ENST00000368215 C16orf97H3BN30 126 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 AP4M1O00189 453 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 IL18BPO95998 194 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 SNRPCP09234 159 aaKnown RBP7.16□□□□□ -1.26
PTPRK-206ENST00000368215 OPRK1P41145 380 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 RNF212Q495C1 297 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 C1orf185Q5T7R7 199 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 RHOVQ96L33 236 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 DMRTA2Q96SC8 542 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 ABCA1O95477 2261 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 A0A1W2PRD5 423 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 A0A1W2PRF3 423 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 A0A1W2PRM7 423 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 FGF16O43320 207 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 TAS2R45P59539 299 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 FOXL2NBQ6ZUU3 175 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 ZDHHC16Q969W1 377 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 ZNF355PQ9NSJ1 428 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 MARCH11A6NNE9 402 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 TOX4O94842 621 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 LGALS4P56470 323 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 FAM27E3Q08E93 113 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 TMEM42Q69YG0 159 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 SLC35E3Q7Z769 313 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 OR13A1Q8NGR1 328 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 FAM117AQ9C073 453 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 MED13Q9UHV7 2174 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 CTXND1A0A1B0GTU2 59 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 ZNF98A6NK75 572 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 C17orf98A8MV24 154 aa7.16□□□□□ -1.26
PTPRK-206ENST00000368215 COX7A2P2O60397 106 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms