RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 MRPL30Q8TCC3 161 aaKnown RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 SSC4DQ8WTU2 575 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 LSM10Q969L4 123 aaKnown RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 EGR4Q05215 589 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 UBE2V2Q15819 145 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 TRAV20A0A0B4J274 112 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 IGSF23A1L1A6 192 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 KIAA1324LA8MWY0 1029 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 OR10J1P30954 320 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 PKIAP61925 76 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 P2RY6Q15077 328 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 NSUN5P2Q63ZY6 315 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 LRRC75AQ8NAA5 344 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 JMJD8Q96S16 334 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 ELOVL1Q9BW60 279 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 SPTBN1Q01082 2364 aaKnown RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 HELTA6NFD8 242 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 IFNL4K9M1U5 179 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 MGST3O14880 152 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 ERVS71-1P61550 626 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 LINC00469Q8N7U9 141 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 EAF1Q96JC9 268 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 SOSTQ9BQB4 213 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 VPS25Q9BRG1 176 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 NEUROG3Q9Y4Z2 214 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 HILPDAQ9Y5L2 63 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 MYO7AQ13402 2215 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 ZSWIM8A7E2V4 1837 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 A0A1W2PR77 199 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 PATE3B3GLJ2 98 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 FAM106CPP0CH98 169 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 H2BFSP57053 126 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 HLA-DRB5Q30154 266 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM45BQ96B21 275 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 HDHD3Q9BSH5 251 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-205ENST00000367251 LINC00470Q9BZP3 86 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 MSL2Q9HCI7 577 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 TINAGQ9UJW2 476 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 WIPI2Q9Y4P8 454 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 RAB29O14966 203 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 HIKESHIQ53FT3 197 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 SELENOHQ8IZQ5 122 aaKnown RBP7.78□□□□□ -1.16
SYNE1-205ENST00000367251 POC1AQ8NBT0 407 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 OR11H4Q8NGC9 324 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 OR1L8Q8NGR8 309 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 TM2D1Q9BX74 207 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 C5orf66Q9H5L9 145 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 M0R143 59 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 G6PCP35575 357 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 FAM106AQ4KMX7 169 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 CISD1Q9NZ45 108 aaKnown RBP7.78□□□□□ -1.16
SYNE1-205ENST00000367251 A0A1W2PS18 150 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 PAGE4O60829 102 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 PLAUP00749 431 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 PDLIM4P50479 330 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 SRSF9Q13242 221 aaKnown RBP eCLIP7.78□□□□□ -1.16
SYNE1-205ENST00000367251 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 FAM222BQ8WU58 562 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 OR2J1Q9GZK6 312 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 BET1LQ9NYM9 111 aa7.78□□□□□ -1.16
SYNE1-205ENST00000367251 SPINK4O60575 86 aa7.77□□□□□ -1.16
SYNE1-205ENST00000367251 SRSF10O75494 262 aaKnown RBP7.77□□□□□ -1.16
SYNE1-205ENST00000367251 RCC1P18754 421 aaPredicted RBP7.77□□□□□ -1.16
SYNE1-205ENST00000367251 B2MP61769 119 aa7.77□□□□□ -1.16
SYNE1-205ENST00000367251 OR1L6Q8NGR2 347 aa7.77□□□□□ -1.16
SYNE1-205ENST00000367251 FLYWCH2Q96CP2 140 aaKnown RBP7.77□□□□□ -1.16
SYNE1-205ENST00000367251 GP6Q9HCN6 339 aa7.77□□□□□ -1.16
SYNE1-205ENST00000367251 NPVFQ9HCQ7 196 aa7.77□□□□□ -1.16
SYNE1-205ENST00000367251 SVILO95425 2214 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 ERVFRD-1P60508 538 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PSG5Q15238 335 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 C10orf113Q5VZT2 155 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 OR1N2Q8NGR9 330 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SAP25Q8TEE9 199 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SGK494Q96LW2 274 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PGLYRP1O75594 196 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-205ENST00000367251 MT-ND6P03923 174 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 DANCRP0C864 163 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 DAOP14920 347 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 GFRA1P56159 465 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 RIGQ13278 110 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 TMEM187Q14656 261 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SPINK9Q5DT21 86 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SLC25A53Q5H9E4 307 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 CXorf66Q5JRM2 361 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-205ENST00000367251 C1orf185Q5T7R7 199 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 OR4P4Q8NGL7 312 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 COX6A1P12074 109 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 UCP2P55851 309 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 ATP5IP56385 69 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PRSS8Q16651 343 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 TMEM255AQ5JRV8 349 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SLC16A13Q7RTY0 426 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 PUSL1Q8N0Z8 303 aaKnown RBP7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SHISA5Q8N114 240 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 SLC25A45Q8N413 288 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 OR10C1Q96KK4 312 aa7.77□□□□□ -1.17
SYNE1-205ENST00000367251 ATG101Q9BSB4 218 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms