RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 DUXBA0A1W2PPF3 345 aa15.91■□□□□ 0.14
CLIP2-202ENST00000361545 CSN3P07498 182 aa15.91■□□□□ 0.14
CLIP2-202ENST00000361545 ZFP36L1Q07352 338 aaKnown RBP15.91■□□□□ 0.14
CLIP2-202ENST00000361545 MMD2Q8IY49 270 aa15.91■□□□□ 0.14
CLIP2-202ENST00000361545 MS4A10Q96PG2 267 aa15.91■□□□□ 0.14
CLIP2-202ENST00000361545 GP6Q9HCN6 339 aa15.91■□□□□ 0.14
CLIP2-202ENST00000361545 TMSB15BA0A087X1C1 80 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 H0Y980 276 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 P01737 135 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 LIPFP07098 398 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 BSXQ3C1V8 233 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 C9orf106Q8NAJ2 232 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 FAM216AQ8WUB2 273 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 PPP1R3EQ9H7J1 279 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 DHRS7CA6NNS2 312 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 ID1P41134 155 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 SNRPEP62304 92 aaKnown RBP15.9■□□□□ 0.14
CLIP2-202ENST00000361545 TMEM255AQ5JRV8 349 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 DCAF12L2Q5VW00 463 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 SPACA3Q8IXA5 215 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 TMEM204Q9BSN7 226 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 GHITMQ9H3K2 345 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 HYPMO75409 117 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 FAM201AQ5SY85 155 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 MDC1Q14676 2089 aaKnown RBP15.9■□□□□ 0.14
CLIP2-202ENST00000361545 NPIPB9F8W1W9 429 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 OR10J1P30954 320 aa15.9■□□□□ 0.14
CLIP2-202ENST00000361545 PGLYRP1O75594 196 aaPredicted RBP15.89■□□□□ 0.14
CLIP2-202ENST00000361545 VSIG10L2P0DP72 767 aa15.89■□□□□ 0.14
CLIP2-202ENST00000361545 KHDC3LQ587J8 217 aa15.89■□□□□ 0.14
CLIP2-202ENST00000361545 TEX29Q8N6K0 151 aa15.89■□□□□ 0.14
CLIP2-202ENST00000361545 OR5P3Q8WZ94 311 aa15.89■□□□□ 0.14
CLIP2-202ENST00000361545 SSTR5P35346 364 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 PTTG1IPP53801 180 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 OR9G1Q8NH87 305 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 SLC25A38Q96DW6 304 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 NPIPB13A6NJU9 1138 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 NPIPB4C9JG80 1138 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 PLAUP00749 431 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 STXBP6Q8NFX7 210 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 ZNF837Q96EG3 531 aaPredicted RBP15.89■□□□□ 0.13
CLIP2-202ENST00000361545 PITPNC1Q9UKF7 332 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 IGLV3-12A0A075B6K2 115 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 TBX6O95947 436 aaPredicted RBP15.89■□□□□ 0.13
CLIP2-202ENST00000361545 HIST1H1EP10412 219 aaKnown RBP15.89■□□□□ 0.13
CLIP2-202ENST00000361545 ATP6V0CP27449 155 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 TMEM222Q9H0R3 208 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 NAT8Q9UHE5 227 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 PTGDSP41222 190 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 RUNX1Q01196 453 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 WDYHV1Q96HA8 205 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 MEGF10Q96KG7 1140 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 Q96M66 194 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 NPVFQ9HCQ7 196 aa15.89■□□□□ 0.13
CLIP2-202ENST00000361545 AURKAIP1Q9NWT8 199 aaPredicted RBP15.89■□□□□ 0.13
CLIP2-202ENST00000361545 RGS13O14921 159 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 CALHM1Q8IU99 346 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 CLEC7AQ9BXN2 247 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 FOXH1O75593 365 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 CFHR1Q03591 330 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 SAXO1Q8IYX7 474 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 FADS6Q8N9I5 356 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 RBM14Q96PK6 669 aaKnown RBP15.88■□□□□ 0.13
CLIP2-202ENST00000361545 TMEM106BQ9NUM4 274 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 EFEMP2O95967 443 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 CXorf1O96002 111 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 IGHV1-2P23083 117 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 HOXA4Q00056 320 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-202ENST00000361545 UNC119Q13432 240 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 FGFRL1Q8N441 504 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 OR10G8Q8NGN5 311 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 HELTA6NFD8 242 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 SRSF10O75494 262 aaKnown RBP15.88■□□□□ 0.13
CLIP2-202ENST00000361545 NUBP1P53384 320 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 LCN2P80188 198 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 VAMP3Q15836 100 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 PCSK4Q6UW60 755 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 SLC2A8Q9NY64 477 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 VAX2Q9UIW0 290 aa15.88■□□□□ 0.13
CLIP2-202ENST00000361545 ZNF137PP52743 207 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 PAXXQ9BUH6 204 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 TMEM140Q9NV12 185 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 IGSF23A1L1A6 192 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 MGPP08493 103 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 SMUG1Q53HV7 270 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 RNFT1Q5M7Z0 435 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 FLVCR1-AS1Q8TAF5 88 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 FAM210BQ96KR6 192 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 PATJQ8NI35 1801 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 REG1AP05451 166 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 OR5AL1P0C617 328 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 AQP3Q92482 292 aa15.87■□□□□ 0.13
CLIP2-202ENST00000361545 Q1RN00 199 aa15.86■□□□□ 0.13
CLIP2-202ENST00000361545 VKORC1L1Q8N0U8 176 aa15.86■□□□□ 0.13
CLIP2-202ENST00000361545 GPR132Q9UNW8 380 aa15.86■□□□□ 0.13
CLIP2-202ENST00000361545 OR2T8A6NH00 312 aa15.86■□□□□ 0.13
CLIP2-202ENST00000361545 AKAP6Q13023 2319 aa15.86■□□□□ 0.13
CLIP2-202ENST00000361545 SNRNP40Q96DI7 357 aaKnown RBP15.86■□□□□ 0.13
CLIP2-202ENST00000361545 DEPPQ9NTK1 212 aa15.86■□□□□ 0.13
CLIP2-202ENST00000361545 JPT1Q9UK76 154 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms