RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NUDT11Q96G61 164 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 MPDU1O75352 247 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 LIFP15018 202 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 CIRBPQ14011 172 aaKnown RBP13.87□□□□□ -0.19
COL18A1-203ENST00000359759 TMEM252Q8N6L7 170 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 NINQ8N4C6 2090 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 TMEM262E9PQX1 116 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 SERF2P84101 59 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 TFF2Q03403 129 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 TJP1Q07157 1748 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 DLL1O00548 723 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 OR2H2O95918 312 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 IL4P05112 153 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 OR2Y1Q8NGV0 311 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 IGHV5-10-1A0A0J9YXX1 117 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 HAX1O00165 279 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 SMIM13P0DJ93 91 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 CRYBB3P26998 211 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 GGTLC2Q14390 218 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 ZNF826PQ6ZT77 177 aa13.87□□□□□ -0.19
COL18A1-203ENST00000359759 PSMB11A5LHX3 300 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 C1QTNF12Q5T7M4 302 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 ZNF660Q6AZW8 331 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-203ENST00000359759 VKORC1L1Q8N0U8 176 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 DDB2Q92466 427 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 SCN3AQ9NY46 2000 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 H0Y980 276 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 IFITM3Q01628 133 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 ERASQ7Z444 233 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 FADS6Q8N9I5 356 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 NRAPQ86VF7 1730 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 CTAG1AP78358 180 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 MEF2BQ02080 365 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-203ENST00000359759 ST6GALNAC6Q969X2 333 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 HLA-DRB1P01911 266 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 TMEM45BQ96B21 275 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 SSBP3Q9BWW4 388 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-203ENST00000359759 TMEM229AB2RXF0 380 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 CCL21O00585 134 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 JOSD1Q15040 202 aaPredicted RBP13.86□□□□□ -0.19
COL18A1-203ENST00000359759 SLX4Q8IY92 1834 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 DSPPQ9NZW4 1301 aa13.86□□□□□ -0.19
COL18A1-203ENST00000359759 A0A1W2PPC1 479 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 IGKV1D-16P01601 117 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 SELENOHQ8IZQ5 122 aaKnown RBP13.85□□□□□ -0.19
COL18A1-203ENST00000359759 TMEM52Q8NDY8 209 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 AGAP20933 346 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 FBXW9Q5XUX1 488 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 INO80CQ6PI98 192 aaPredicted RBP13.85□□□□□ -0.19
COL18A1-203ENST00000359759 WNT10AQ9GZT5 417 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 HLA-DQA1P01909 254 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 MT-ND6P03923 174 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 NMBP08949 121 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 RND2P52198 227 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 Q5PR19 223 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 TAF15Q92804 592 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL18A1-203ENST00000359759 C18orf15Q96N68 181 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 TTTY12Q9BZ98 90 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 OR51M1Q9H341 326 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 YBX2Q9Y2T7 364 aaKnown RBP13.85□□□□□ -0.19
COL18A1-203ENST00000359759 CACNA1CQ13936 2221 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 LNP1A1A4G5 178 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 TRGC1P0CF51 173 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 PSG4Q00888 419 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 LY6EQ16553 131 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 CCDC144NLQ6NUI1 221 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 GPR146Q96CH1 333 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 MS4A5Q9H3V2 200 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 TUBD1Q9UJT1 453 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 C16orf97H3BN30 126 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 GDF9O60383 454 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 BHLHA9Q7RTU4 235 aa13.85□□□□□ -0.19
COL18A1-203ENST00000359759 GEMIN7Q9H840 131 aaKnown RBP13.85□□□□□ -0.19
COL18A1-203ENST00000359759 PGLYRP1O75594 196 aaPredicted RBP13.84□□□□□ -0.19
COL18A1-203ENST00000359759 HOXC4P09017 264 aaPredicted RBP13.84□□□□□ -0.19
COL18A1-203ENST00000359759 TGIF1Q15583 401 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 UNQ5815/PRO19632Q6UWF5 114 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 MRPL16Q9NX20 251 aaKnown RBP13.84□□□□□ -0.19
COL18A1-203ENST00000359759 MBD1Q9UIS9 605 aaPredicted RBP13.84□□□□□ -0.19
COL18A1-203ENST00000359759 DNAL4O96015 105 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 IGHV3-23P01764 117 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 UNC119Q13432 240 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 PMS2CLQ68D20 193 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 LHX8Q68G74 356 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 OR10AG1Q8NH19 301 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 DUX5Q96PT3 197 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 TRAV8-6A0A0B4J262 113 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 A0A0U1RQV5 110 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 TNFSF14O43557 240 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 GAPDHP04406 335 aaKnown RBP13.84□□□□□ -0.19
COL18A1-203ENST00000359759 GPX1P07203 203 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 PRF1P14222 555 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 CEACAM21Q3KPI0 293 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 APOBEC4Q8WW27 367 aaKnown RBP13.84□□□□□ -0.19
COL18A1-203ENST00000359759 ZG16O60844 167 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 PEAR1Q5VY43 1037 aaPredicted RBP13.84□□□□□ -0.19
COL18A1-203ENST00000359759 CHODLQ9H9P2 273 aa13.84□□□□□ -0.19
COL18A1-203ENST00000359759 IGHV3-66A0A0C4DH42 116 aa13.83□□□□□ -0.19
COL18A1-203ENST00000359759 CELA2AP08217 269 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms