RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 HERPUD1Q15011 391 aa12.04□□□□□ -0.48
SIRPA-202ENST00000358771 ACSF3Q4G176 576 aaPredicted RBP12.04□□□□□ -0.48
SIRPA-202ENST00000358771 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
SIRPA-202ENST00000358771 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
SIRPA-202ENST00000358771 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
SIRPA-202ENST00000358771 SERTAD4Q9NUC0 356 aa12.04□□□□□ -0.48
SIRPA-202ENST00000358771 COL6A3P12111 3177 aa12.04□□□□□ -0.48
SIRPA-202ENST00000358771 H7BYZ3 331 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 ZG16O60844 167 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 LINC00205P59089 165 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 PARD6AQ9NPB6 346 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 ODAMA1E959 279 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 H3BQ15 152 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 ZNF737O75373 536 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 MT-CO2P00403 227 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 TNFRSF1AP19438 455 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 CD200P41217 278 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 FAM53AQ6NSI3 398 aaPredicted RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 LRP11Q86VZ4 500 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 PATZ1Q9HBE1 687 aaKnown RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 NIT2Q9NQR4 276 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 RPH3ALQ9UNE2 315 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 A0A1W2PPQ1 181 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 BTBD17A6NE02 478 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 NAPSAO96009 420 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 EIF2S3P41091 472 aaKnown RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 H1FOOQ8IZA3 346 aaPredicted RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 COMMD5Q9GZQ3 224 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 OR6C3Q9NZP0 311 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 CDK2AP1O14519 115 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 PTBP3O95758 552 aaKnown RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 MT-ND4LP03901 98 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 COLCA1Q6ZS62 124 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
SIRPA-202ENST00000358771 RNF7Q9UBF6 113 aa12.03□□□□□ -0.48
SIRPA-202ENST00000358771 PTPRQQ9UMZ3 2332 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 ANKHD1Q8IWZ3 2542 aaKnown RBP12.02□□□□□ -0.48
SIRPA-202ENST00000358771 WISP2O76076 250 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 APOA2P02652 100 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 PGA5P0DJD9 388 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 RND3P61587 244 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 BTNL8Q6UX41 500 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 LRFN3Q9BTN0 628 aa12.02□□□□□ -0.48
SIRPA-202ENST00000358771 DNASE2O00115 360 aaPredicted RBP12.02□□□□□ -0.49
SIRPA-202ENST00000358771 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.49
SIRPA-202ENST00000358771 C1orf185Q5T7R7 199 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 NCR3LG1Q68D85 454 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 SMIM8Q96KF7 97 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 RBKSQ9H477 322 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 RPRMQ9NS64 109 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 IGKV1-6A0A0C4DH72 117 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 DUXBA0A1W2PPF3 345 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 C17orf98A8MV24 154 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 C16orf97H3BN30 126 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 RAMP3O60896 148 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 DLK1P80370 383 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
SIRPA-202ENST00000358771 ACP7Q6ZNF0 438 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 ZNF561Q8N587 486 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 ACY3Q96HD9 319 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 TMEM204Q9BSN7 226 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 SAP30LQ9HAJ7 183 aa12.02□□□□□ -0.49
SIRPA-202ENST00000358771 FGF16O43320 207 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 FABP9Q0Z7S8 132 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 PLA2G2CQ5R387 149 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 C1orf87Q8N0U7 546 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 EIF4E3Q8N5X7 224 aaKnown RBP12.01□□□□□ -0.49
SIRPA-202ENST00000358771 ZNF645Q8N7E2 425 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 ATG2AQ2TAZ0 1938 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 FRYLO94915 3013 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 LOC105371267A0A1B0GV96 52 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 CEACAM18A8MTB9 384 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 OR7C2O60412 319 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 SELLP14151 372 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 GNB1P62873 340 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 RTL8BQ17RB0 113 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 RPL39P5Q59GN2 51 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 MALSU1Q96EH3 234 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 METRNQ9UJH8 293 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 MGST3O14880 152 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 SS18L1O75177 396 aaPredicted RBP12.01□□□□□ -0.49
SIRPA-202ENST00000358771 APELAP0DMC3 54 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 SRSF4Q08170 494 aaKnown RBP12.01□□□□□ -0.49
SIRPA-202ENST00000358771 GP6Q9HCN6 339 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 NUP210LQ5VU65 1888 aa12.01□□□□□ -0.49
SIRPA-202ENST00000358771 MARCH11A6NNE9 402 aa12□□□□□ -0.49
SIRPA-202ENST00000358771 ATXN7O15265 892 aaPredicted RBP12□□□□□ -0.49
SIRPA-202ENST00000358771 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
SIRPA-202ENST00000358771 CCL20P78556 96 aa12□□□□□ -0.49
SIRPA-202ENST00000358771 NANPQ8TBE9 248 aa12□□□□□ -0.49
SIRPA-202ENST00000358771 RAB39BQ96DA2 213 aa12□□□□□ -0.49
SIRPA-202ENST00000358771 RHOVQ96L33 236 aa12□□□□□ -0.49
SIRPA-202ENST00000358771 TMEM56Q96MV1 263 aa12□□□□□ -0.49
SIRPA-202ENST00000358771 PFDN5Q99471 154 aa12□□□□□ -0.49
SIRPA-202ENST00000358771 SSX3Q99909 188 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms