RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 TMEM170BQ5T4T1 132 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 ANKRD33Q7Z3H0 272 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 AQP10Q96PS8 301 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 IGHV3-35A0A0C4DH35 117 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 TRA2AQ13595 282 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL11A1-202ENST00000358392 PMCHL1Q16048 86 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 LINC01465Q8N7H1 131 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 MOSPD3O75425 235 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 GPX1P07203 203 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 LSM6P62312 80 aaKnown RBP9.7□□□□□ -0.86
COL11A1-202ENST00000358392 C14orf144Q96I85 54 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
COL11A1-202ENST00000358392 TMEM229AB2RXF0 380 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 J3QT63 122 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 CCL21O00585 134 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 PMS2CLQ68D20 193 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 ZNF645Q8N7E2 425 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 LHFPL5Q8TAF8 219 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 C9JCJ5 164 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 PRF1P14222 555 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 CRYBB3P26998 211 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 CHRNA10Q9GZZ6 450 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 PPIAL4EA0A075B759 164 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 A0A0B4J293 547 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 PPIAL4DF5H284 164 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 HPRT1P00492 218 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 HLA-DRB1P01911 266 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 PPIAL4FP0DN26 164 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 CTGFP29279 349 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 TGIF1Q15583 401 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 CXorf66Q5JRM2 361 aaPredicted RBP9.69□□□□□ -0.86
COL11A1-202ENST00000358392 PEAR1Q5VY43 1037 aaPredicted RBP9.69□□□□□ -0.86
COL11A1-202ENST00000358392 NFAM1Q8NET5 270 aaPredicted RBP9.69□□□□□ -0.86
COL11A1-202ENST00000358392 OPN3Q9H1Y3 402 aaPredicted RBP9.69□□□□□ -0.86
COL11A1-202ENST00000358392 PPIAL4AQ9Y536 164 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 IGHV1OR15-9A0A0B4J2B8 117 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 GAPDHP04406 335 aaKnown RBP9.69□□□□□ -0.86
COL11A1-202ENST00000358392 VN1R4Q7Z5H5 301 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 C1QTNF9BB2RNN3 333 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 CDS2O95674 445 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 RPL27AP46776 148 aaKnown RBP9.69□□□□□ -0.86
COL11A1-202ENST00000358392 SCNM1Q9BWG6 230 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 KCNK7Q9Y2U2 307 aa9.69□□□□□ -0.86
COL11A1-202ENST00000358392 THY1P04216 161 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 HIST1H1AQ02539 215 aaPredicted RBP9.68□□□□□ -0.86
COL11A1-202ENST00000358392 C1orf210Q8IVY1 113 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 PUSL1Q8N0Z8 303 aaKnown RBP9.68□□□□□ -0.86
COL11A1-202ENST00000358392 CADM4Q8NFZ8 388 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 MARVELD3Q96A59 401 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 GLULP15104 373 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 HOGA1Q86XE5 327 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 OR10AG1Q8NH19 301 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 LRRC3BQ96PB8 259 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 ZNF385AQ96PM9 386 aaKnown RBP9.68□□□□□ -0.86
COL11A1-202ENST00000358392 MRPS16Q9Y3D3 137 aaKnown RBP9.68□□□□□ -0.86
COL11A1-202ENST00000358392 ANKRD31Q8N7Z5 1873 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 PEX11BO96011 259 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 GAB4Q2WGN9 574 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 SFTA2Q6UW10 78 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 ZNF826PQ6ZT77 177 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 NPFFR1Q9GZQ6 430 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 hCG_38984A0A1B0GV85 526 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 OR4C45A6NMZ5 311 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 CA1P00915 261 aaPredicted RBP9.68□□□□□ -0.86
COL11A1-202ENST00000358392 ERGP11308 486 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 CDX1P47902 265 aaPredicted RBP9.68□□□□□ -0.86
COL11A1-202ENST00000358392 HMGA2P52926 109 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 GPBAR1Q8TDU6 330 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 A0A1W2PP11 408 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 TMEM91Q6ZNR0 172 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 ATXN7O15265 892 aaPredicted RBP9.68□□□□□ -0.86
COL11A1-202ENST00000358392 LINC00596Q86U02 117 aa9.68□□□□□ -0.86
COL11A1-202ENST00000358392 NDUFA3O95167 84 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 NANOS3P60323 173 aaKnown RBP9.67□□□□□ -0.86
COL11A1-202ENST00000358392 CHST5Q9GZS9 411 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 IGHV4-39P01824 125 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 EGR1P18146 543 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 ZNF345Q14585 488 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 C10orf35Q96D05 121 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 S4R3C0 116 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 ARID1AO14497 2285 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 A0A1B0GV72 72 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 LNP1A1A4G5 178 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 DLL1O00548 723 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 WNT9BO14905 357 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 AGAP20933 346 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 APCDD1LQ8NCL9 501 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 PIKFYVEQ9Y2I7 2098 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 FOXI3A8MTJ6 420 aaPredicted RBP9.67□□□□□ -0.86
COL11A1-202ENST00000358392 BGLAPP02818 100 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 FAM106CPP0CH98 169 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 ST6GALNAC2Q9UJ37 374 aa9.67□□□□□ -0.86
COL11A1-202ENST00000358392 RND2P52198 227 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms