RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ACTL10Q5JWF8 245 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 RARRES2Q99969 163 aa3.56□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF324O75467 553 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 Q6ZSR3 168 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 IL1F10Q8WWZ1 152 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 PARP12Q9H0J9 701 aaKnown RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 GNG12Q9UBI6 72 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 DMWDQ09019 674 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM196Q5HYL7 178 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SPEM1Q8N4L4 309 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 NUDT11Q96G61 164 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 EFEMP2O95967 443 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 EFNB2P52799 333 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 C12orf76Q8N812 135 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 DIRC2Q96SL1 478 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TPSD1Q9BZJ3 242 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 WSB2Q9NYS7 404 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 LRRC10Q5BKY1 277 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 IGKV1D-42A0A075B6H8 117 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 H0Y8G0 127 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 IL18BPO95998 194 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 OR10AC1Q8NH08 325 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 KIR2DL5BA0A0G2JN68 375 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 KIR2DL5BA0A0G2JPC4 375 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 LSM11P83369 360 aaKnown RBP eCLIP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 CXorf66Q5JRM2 361 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 KIR2DL5AQ8N109 375 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 PRSS3P2Q8NHM4 247 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SLC25A33Q9BSK2 321 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 CBLN3Q6UW01 205 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 WBP2Q969T9 261 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TNFRSF19Q9NS68 423 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 OR7C2O60412 319 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF645Q8N7E2 425 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 Q8WTZ3 238 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 NRXN2Q9P2S2 1712 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 A0A1W2PRS3 328 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 C1QL3Q5VWW1 255 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SP1P08047 785 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 C1orf61Q13536 156 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 DYRK2Q92630 601 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 IL17BQ9UHF5 180 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 LHFPL6Q9Y693 200 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 GALR2O43603 387 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 YPEL1O60688 119 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 IGKV1D-16P01601 117 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 PRAMEF5Q5TYX0 476 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 PRAMEF6Q5VXH4 476 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 CST9Q5W186 159 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 YPEL2Q96QA6 119 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 NRSN2Q9GZP1 204 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SERTAD4Q9NUC0 356 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 COX11Q9Y6N1 276 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 HCFC1P51610 2035 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TRGV10A0A0A0MS01 117 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TM4SF5O14894 197 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 F12P00748 615 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 IGLV3-19P01714 112 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TSPAN7P41732 249 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 VN1R17PQ8TDU5 208 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SMPXQ9UHP9 88 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 CACNA1GO43497 2377 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SLC25A17O43808 307 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 REPIN1Q9BWE0 567 aaKnown RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 DNAJC4Q9NNZ3 241 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 IZUMO1RA6ND01 250 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 SIVA1O15304 175 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 NDUFB4O95168 129 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 CCL5P13501 91 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 HTR1DP28221 377 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 OR1L1Q8NH94 360 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TICRRQ7Z2Z1 1910 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 OR9G9P0C7N8 305 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 KIR2DL2P43627 348 aaPredicted RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 RAB9AP51151 201 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF146Q15072 292 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 TEPPQ6URK8 271 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 GPR146Q96CH1 333 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 ASPHD2Q6ICH7 369 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 RBPMS2Q6ZRY4 209 aaKnown RBP3.55□□□□□ -1.84
SYNE2-204ENST00000358025 FGFRL1Q8N441 504 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 OR2H1Q9GZK4 316 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 A0A0G2JMZ2 1700 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 LRRC37A2A6NM11 1700 aa3.55□□□□□ -1.84
SYNE2-204ENST00000358025 A0A1B0GV90 55 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 KIAA1324LA8MWY0 1029 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 KLRC4-KLRK1H3BQV0 150 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 HSPE1P61604 102 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 MRPL38Q96DV4 380 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 INSM1Q01101 510 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 MBNL1Q9NR56 388 aaKnown RBP3.54□□□□□ -1.84
SYNE2-204ENST00000358025 A0A1W2PPC4 97 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 PVRP15151 417 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 TCF24Q7RTU0 167 aa3.54□□□□□ -1.84
SYNE2-204ENST00000358025 ALKBH7Q9BT30 221 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms