RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 A0A1W2PRS3 328 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 DPRXA6NFQ7 191 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 FAM157AC9JC47 383 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 DHHO43323 396 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 MMD2Q8IY49 270 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 GPR35Q9HC97 309 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 HCFC1P51610 2035 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 C7orf71A4D174 169 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 ZNF891A8MT65 544 aaPredicted RBP5.68□□□□□ -1.5
TRIM38-201ENST00000357085 CHST1O43916 411 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 EML2O95834 649 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 CA3P07451 260 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 HGFACQ04756 655 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 Q6ZSR6 202 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 D2HGDHQ8N465 521 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 ADAT3Q96EY9 351 aaPredicted RBP5.68□□□□□ -1.5
TRIM38-201ENST00000357085 NXF5Q9H1B4 397 aaKnown RBP5.68□□□□□ -1.5
TRIM38-201ENST00000357085 PILRAQ9UKJ1 303 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 CCL26Q9Y258 94 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 C19orf67A6NJJ6 358 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 RBFOX2O43251 390 aaKnown RBP eCLIP5.68□□□□□ -1.5
TRIM38-201ENST00000357085 RIGQ13278 110 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 TBC1D28Q2M2D7 210 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 VSTM2AQ8TAG5 236 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 TMEM230Q96A57 120 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 PRDM14Q9GZV8 571 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 ATP23Q9Y6H3 246 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 SPTBN1Q01082 2364 aaKnown RBP5.68□□□□□ -1.5
TRIM38-201ENST00000357085 CENPVL1A0A0U1RR11 272 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 SP1P08047 785 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 CD1BP29016 333 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 OR52M1Q8NGK5 317 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 SPPL3Q8TCT6 385 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 S1PR3Q99500 378 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 TBC1D29Q9UFV1 150 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 SVILO95425 2214 aa5.68□□□□□ -1.5
TRIM38-201ENST00000357085 AAED1Q7RTV5 226 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SCCPDHQ8NBX0 429 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 PERPQ96FX8 193 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 EXPH5Q8NEV8 1989 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 NCBP2LA6PVI3 153 aaKnown RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SNURFLB1AK76 121 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SMPD2O60906 423 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 MRPL33O75394 65 aaKnown RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 ZNF324O75467 553 aaPredicted RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SRSF10O75494 262 aaKnown RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 OR9G9P0C7N8 305 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 CEBPBP17676 345 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 COMPP49747 757 aaPredicted RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 DSCR4P56555 118 aaPredicted RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 C1orf53Q5VUE5 145 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 FBXW9Q5XUX1 488 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 GAPTQ8N292 157 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 PRR18Q8N4B5 295 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 KIAA1549Q9HCM3 1950 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 PLCE1Q9P212 2302 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 QRFPP83859 136 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 CHTOPQ9Y3Y2 248 aaKnown RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 OR51B2Q9Y5P1 312 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 A8MWL6 223 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 TSPAN2O60636 221 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SMIM10L1P0DMW3 83 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 OTX2P32243 289 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 MRPS11P82912 194 aaKnown RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 PMP22Q01453 160 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 CSRP2Q16527 193 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 ZNF324BQ6AW86 544 aaPredicted RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SMIM10Q96HG1 83 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 NPCDR1Q9BY65 106 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 IGLV3-32A0A0A0MS00 114 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 OOEPA6NGQ2 149 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SERF1AO75920 110 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 GNG3P63215 75 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 RNPS1Q15287 305 aaKnown RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 IL36BQ9NZH7 164 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 K7EP13 123 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 PPOXP50336 477 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SELENOHQ8IZQ5 122 aaKnown RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SPSB4Q96A44 273 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 R3HDMLQ9H3Y0 253 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 FGF22Q9HCT0 170 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SERGEFQ9UGK8 458 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 IGKV1D-42A0A075B6H8 117 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 TUSC2O75896 110 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 FOLR3P41439 243 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 SSPNQ14714 243 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 TMEFF1Q8IYR6 380 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 PRR22Q8IZ63 422 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 OR10AG1Q8NH19 301 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 COPS9Q8WXC6 57 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 FAM131CQ96AQ9 280 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 POM121L2Q96KW2 1035 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 ZNF407Q9C0G0 2248 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 TIAF1O95411 115 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 PAQR4Q8N4S7 273 aaPredicted RBP5.67□□□□□ -1.5
TRIM38-201ENST00000357085 IL23AQ9NPF7 189 aa5.67□□□□□ -1.5
TRIM38-201ENST00000357085 FNDC10F2Z333 226 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 FTH1P19P0C7X4 201 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms