RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 Q6ZS46 218 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 LYG1Q8N1E2 194 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 KIR3DL3Q8N743 410 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 LINC00469Q8N7U9 141 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 GDPD1Q8N9F7 314 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ZNF596Q8TC21 504 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RTBDNQ9BSG5 229 aaPredicted RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 TOLLIPQ9H0E2 274 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 SDHAF2Q9NX18 166 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 OR2W1Q9Y3N9 320 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CMYA5Q8N3K9 4069 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 PCP4L1A6NKN8 68 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 H7C2Y5 167 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RBMXL2O75526 392 aaKnown RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 RAB3DO95716 219 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CRYBA1P05813 215 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CNTFRP26992 372 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CD34P28906 385 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 AP3S2P59780 193 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 PLGLAQ15195 96 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 TRIM16LQ309B1 348 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RNASE10Q5GAN6 216 aaKnown RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 NCR3LG1Q68D85 454 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 HIST2H2BDQ6DRA6 164 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 TOMM5Q8N4H5 51 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 TMEM229BQ8NBD8 167 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ADAD2Q8NCV1 583 aaKnown RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 OR52M1Q8NGK5 317 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 MARCH1Q8TCQ1 289 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 BORCS5Q969J3 196 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RPEQ96AT9 228 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CLEC7AQ9BXN2 247 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 FXYD6Q9H0Q3 95 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 MMP28Q9H239 520 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 MGAT4AQ9UM21 535 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 A0A1W2PPI3 338 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 SH2D7A6NKC9 451 aaPredicted RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 SRRM4A7MD48 611 aaKnown RBP3.24□□□□□ -1.89
LIG4-201ENST00000356922 HSD17B6O14756 317 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RAMP3O60896 148 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 UPK1BO75841 260 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 IGHV4-59P01825 116 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RBP4P02753 201 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 AMY2AP04746 511 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RLN1P04808 185 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 SRD5A1P18405 259 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 EPHA1P21709 976 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CBX5P45973 191 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ACTBP60709 375 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ACTG1P63261 375 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CTAG1AP78358 180 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 RGS21Q2M5E4 152 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 VAX1Q5SQQ9 334 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 LINC00299Q6ZSB3 139 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 MOB3BQ86TA1 216 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 DRAM1Q8N682 238 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ZNF383Q8NA42 475 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 OR9G1Q8NH87 305 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 SECTM1Q8WVN6 248 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CFHR4Q92496 578 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 ABHD14AQ9BUJ0 271 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 OR2D2Q9H210 308 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 C5orf66Q9H5L9 145 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 TAS2R8Q9NYW2 309 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 JPT1Q9UK76 154 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 VSIG4Q9Y279 399 aa3.24□□□□□ -1.89
LIG4-201ENST00000356922 CEACAM3P40198 252 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 F2RL1P55085 397 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 HNF4GQ14541 408 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 OR2B11Q5JQS5 317 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 C9orf152Q5JTZ5 239 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TRAT1Q6PIZ9 186 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 NRARPQ7Z6K4 114 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 PRIMA1Q86XR5 153 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TMEM219Q86XT9 240 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 LURAP1LQ8IV03 231 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 POC5Q8NA72 575 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 OR6F1Q8NGZ6 308 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 ABHD5Q8WTS1 349 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TMEM230Q96A57 120 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 MRPL20Q9BYC9 149 aaKnown RBP3.23□□□□□ -1.89
LIG4-201ENST00000356922 BEX1Q9HBH7 125 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 ZC4H2Q9NQZ6 224 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 NECAP2Q9NVZ3 263 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 NUP50Q9UKX7 468 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 TIMM23O14925 209 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 GATA3P23771 443 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 PTBP1P26599 531 aaKnown RBP eCLIP3.23□□□□□ -1.89
LIG4-201ENST00000356922 GPR12P47775 334 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 RAB25P57735 213 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 DEFA1P59665 94 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 DEFA3P59666 94 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 SUPT4H1P63272 117 aaKnown RBP3.23□□□□□ -1.89
LIG4-201ENST00000356922 TAGLNQ01995 201 aaKnown RBP3.23□□□□□ -1.89
LIG4-201ENST00000356922 SP6Q3SY56 376 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 Q3ZCU0 254 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 PHLDA2Q53GA4 152 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 IDO2Q6ZQW0 420 aa3.23□□□□□ -1.89
LIG4-201ENST00000356922 MOB1BQ7L9L4 216 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms