RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SOCS1O15524 211 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 LEPROTL1O95214 131 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 CADM4Q8NFZ8 388 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 OR6X1Q8NH79 312 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 DUX5Q96PT3 197 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 NDUFAF3Q9BU61 184 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 TMEM30AQ9NV96 361 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 CTLA4P16410 223 aa10.03□□□□□ -0.8
SPTBN1-202ENST00000356805 FAM90A26D6RGX4 464 aa10.02□□□□□ -0.8
SPTBN1-202ENST00000356805 KBTBD11O94819 623 aa10.02□□□□□ -0.8
SPTBN1-202ENST00000356805 HYAL1Q12794 435 aa10.02□□□□□ -0.8
SPTBN1-202ENST00000356805 COL22A1Q8NFW1 1626 aaPredicted RBP10.02□□□□□ -0.8
SPTBN1-202ENST00000356805 CELA2BP08218 269 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 FAM216AQ8WUB2 273 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 CHRNA10Q9GZZ6 450 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 SLC52A3Q9NQ40 469 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 SLC17A3O00476 420 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 WNT9BO14905 357 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 MFAP2P55001 183 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 TMEM136Q6ZRR5 245 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 ZCCHC14Q8WYQ9 949 aaKnown RBP10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 LHX9Q9NQ69 397 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 IL36RNQ9UBH0 155 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 KMT2EQ8IZD2 1858 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 RBFOX2O43251 390 aaKnown RBP eCLIP10.02□□□□□ -0.814e-7■■■■□ 23.3
SPTBN1-202ENST00000356805 RAC3P60763 192 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 OR10AC1Q8NH08 325 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 PGLYRP4Q96LB8 373 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 CCL28Q9NRJ3 127 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 BCORQ6W2J9 1755 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 IGFBP6P24592 240 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 B4GALNT1Q00973 533 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 JOSD1Q15040 202 aaPredicted RBP10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 FAM219BQ5XKK7 198 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 CCDC144NLQ6NUI1 221 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 CBLN4Q9NTU7 201 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 LOC390937A0A1W2PQ73 354 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 FAM106CPP0CH98 169 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 LURAP1LQ8IV03 231 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 MRPL24Q96A35 216 aaKnown RBP10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 CLDN16Q9Y5I7 305 aa10.02□□□□□ -0.81
SPTBN1-202ENST00000356805 RPL31P62899 125 aaKnown RBP10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 RECKO95980 971 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 Q6ZNB5 142 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 CEACAM18A8MTB9 384 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 TNFSF14O43557 240 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 VSIG10L2P0DP72 767 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 AGAP20933 346 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 NFAM1Q8NET5 270 aaPredicted RBP10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 NEU1Q99519 415 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 OPN3Q9H1Y3 402 aaPredicted RBP10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 TMEM50BP56557 158 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 ZNF56Q15929 161 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 C9orf50Q5SZB4 431 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 AMER3Q8N944 861 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 BEND2Q8NDZ0 799 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 TMEM45BQ96B21 275 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 DCTN5Q9BTE1 182 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 CACNA1DQ01668 2161 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 ARAP2Q8WZ64 1704 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 PF4P02776 101 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 PNLIPP16233 465 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 MRPL52Q86TS9 123 aaKnown RBP10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 GUCD1Q96NT3 240 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 CHST5Q9GZS9 411 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 WNT5BQ9H1J7 359 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 CASP8AP2Q9UKL3 1982 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 NKX2-6A6NCS4 301 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 PQLC2Q6ZP29 291 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 DOCK7Q96N67 2140 aa10.01□□□□□ -0.81
SPTBN1-202ENST00000356805 IGHV3-72A0A0B4J1Y9 119 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 OTX1P32242 354 aaPredicted RBP10□□□□□ -0.81
SPTBN1-202ENST00000356805 RPS11P62280 158 aaKnown RBP eCLIP10□□□□□ -0.81
SPTBN1-202ENST00000356805 SLC25A53Q5H9E4 307 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 OR10S1Q8NGN2 331 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 RNF133Q8WVZ7 376 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 SPANXA1Q9NS26 97 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 ST6GALNAC2Q9UJ37 374 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 PSMB11A5LHX3 300 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 K7N7A8 449 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 CFDP00746 253 aaPredicted RBP10□□□□□ -0.81
SPTBN1-202ENST00000356805 R3HDMLQ9H3Y0 253 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 NPFFO15130 113 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 AMY1AP04745 511 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 ZNF362Q5T0B9 420 aaPredicted RBP10□□□□□ -0.81
SPTBN1-202ENST00000356805 SERGEFQ9UGK8 458 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 ABCA3Q99758 1704 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 NRXN3Q9Y4C0 1643 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 C2orf83Q53S99 150 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 C19orf24Q9BVV8 132 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 C7orf71A4D174 169 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 LY6EQ16553 131 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 TMEM56-RWDD3S4R434 201 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 H0Y980 276 aa10□□□□□ -0.81
SPTBN1-202ENST00000356805 TSPAN2O60636 221 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms