RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SELENOTP62341 195 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 ADAD2Q8NCV1 583 aaKnown RBP15.04■□□□□ -0
COL27A1-201ENST00000356083 FAM60AQ9NP50 221 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
COL27A1-201ENST00000356083 TMEM183AQ8IXX5 376 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 ANK1P16157 1881 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 UQCC3Q6UW78 93 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 Q6ZNX1 250 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 LSM10Q969L4 123 aaKnown RBP15.03■□□□□ -0
COL27A1-201ENST00000356083 HMX2A2RU54 273 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 CT62P0C5K7 136 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 RELQ04864 619 aaPredicted RBP15.03■□□□□ -0
COL27A1-201ENST00000356083 NXT2Q9NPJ8 142 aaKnown RBP15.03■□□□□ -0
COL27A1-201ENST00000356083 YAE1D1Q9NRH1 226 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 TNFRSF18Q9Y5U5 241 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 PPYP01298 95 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 HOXB3P14651 431 aaPredicted RBP15.03■□□□□ -0
COL27A1-201ENST00000356083 TEX30Q5JUR7 227 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 PRR19A6NJB7 356 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 S1PR2O95136 353 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 IL24Q13007 206 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 GALNT14Q96FL9 552 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 MS4A3Q96HJ5 214 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 PGLYRP3Q96LB9 341 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
COL27A1-201ENST00000356083 PEAR1Q5VY43 1037 aaPredicted RBP15.02■□□□□ -0
COL27A1-201ENST00000356083 KIR2DL4Q99706 377 aa15.02■□□□□ -0
COL27A1-201ENST00000356083 LOC105371242A0A075B767 164 aa15.02■□□□□ -0
COL27A1-201ENST00000356083 OR1P1Q8NH06 330 aa15.02■□□□□ -0
COL27A1-201ENST00000356083 ARHGAP21Q5T5U3 1957 aa15.02■□□□□ -0
COL27A1-201ENST00000356083 NKX2-6A6NCS4 301 aa15.02■□□□□ -0
COL27A1-201ENST00000356083 JOSD1Q15040 202 aaPredicted RBP15.02■□□□□ -0
COL27A1-201ENST00000356083 DOCK4Q8N1I0 1966 aa15.02■□□□□ -0
COL27A1-201ENST00000356083 ZNF415Q09FC8 603 aa15.02□□□□□ -0.01
COL27A1-201ENST00000356083 SLC25A17O43808 307 aa15.02□□□□□ -0.01
COL27A1-201ENST00000356083 FOXB2Q5VYV0 432 aa15.02□□□□□ -0.01
COL27A1-201ENST00000356083 OR8D4Q8NGM9 314 aa15.02□□□□□ -0.01
COL27A1-201ENST00000356083 YBX2Q9Y2T7 364 aaKnown RBP15.02□□□□□ -0.01
COL27A1-201ENST00000356083 EFNB2P52799 333 aa15.02□□□□□ -0.01
COL27A1-201ENST00000356083 OR2Y1Q8NGV0 311 aa15.02□□□□□ -0.01
COL27A1-201ENST00000356083 PGPA6NDG6 321 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 NSUN5P1Q3KNT7 163 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 LYZL2Q7Z4W2 148 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 C21orf140B9A014 251 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 LCN2P80188 198 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 SHISA5Q8N114 240 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 LINC01587Q99440 93 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 PLXND1Q9Y4D7 1925 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 SLC25A1P53007 311 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 PHLDA1Q8WV24 401 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-201ENST00000356083 PRELID3AQ96N28 172 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 FGF20Q9NP95 211 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-201ENST00000356083 IL19Q9UHD0 177 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 LINC00869P0C866 280 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 ZNF770Q6IQ21 691 aaPredicted RBP15.01□□□□□ -0.01
COL27A1-201ENST00000356083 PDFQ9HBH1 243 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 C18orf15Q96N68 181 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 A8MWL6 223 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 M0R381 172 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 PSCAO43653 123 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 NRN1LQ496H8 165 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 FAM89BQ8N5H3 189 aa15.01□□□□□ -0.01
COL27A1-201ENST00000356083 FOXI3A8MTJ6 420 aaPredicted RBP15□□□□□ -0.01
COL27A1-201ENST00000356083 ATOH7Q8N100 152 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 SRSF12Q8WXF0 261 aaKnown RBP15□□□□□ -0.01
COL27A1-201ENST00000356083 LINC00615Q96LM1 132 aaPredicted RBP15□□□□□ -0.01
COL27A1-201ENST00000356083 BCL2L10Q9HD36 194 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 A0A0B4J2E0 115 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 A0A1B0GX12 115 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 HSPB1P04792 205 aaKnown RBP15□□□□□ -0.01
COL27A1-201ENST00000356083 PDLIM4P50479 330 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 SSC4DQ8WTU2 575 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 RAB24Q969Q5 203 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 TJP1Q07157 1748 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 TMEM177Q53S58 311 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 ZNF506Q5JVG8 444 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 VKORC1L1Q8N0U8 176 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 TP53I13Q8NBR0 393 aaPredicted RBP15□□□□□ -0.01
COL27A1-201ENST00000356083 AKIP1Q9NQ31 210 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 MED12LQ86YW9 2145 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 C1QL3Q5VWW1 255 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 NUDT16L1Q9BRJ7 211 aaKnown RBP15□□□□□ -0.01
COL27A1-201ENST00000356083 FXYD3Q14802 87 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 SPATA45Q537H7 98 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 AWAT1Q58HT5 328 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 OR4D5Q8NGN0 318 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 MRPL30Q8TCC3 161 aaKnown RBP15□□□□□ -0.01
COL27A1-201ENST00000356083 PXMP4Q9Y6I8 212 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 PTPRDP23468 1912 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 TSPOP30536 169 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 ZNF383Q8NA42 475 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 GLMPQ8WWB7 406 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 SCNM1Q9BWG6 230 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 WIPI2Q9Y4P8 454 aa15□□□□□ -0.01
COL27A1-201ENST00000356083 MUC21A0A0G2JKD1 596 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 MUC21A0A140T8X8 626 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 LEUTXA8MZ59 168 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 NKX2-8O15522 239 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 NDUFB6O95139 128 aa14.99□□□□□ -0.01
COL27A1-201ENST00000356083 MUC21Q5SSG8 566 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms