RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 DCAF10Q5QP82 559 aa12.89□□□□□ -0.35
VAT1-201ENST00000355653 ARL6IP6Q8N6S5 226 aa12.89□□□□□ -0.35
VAT1-201ENST00000355653 R3HDM4Q96D70 268 aa12.89□□□□□ -0.35
VAT1-201ENST00000355653 OCIAD1Q9NX40 245 aa12.89□□□□□ -0.35
VAT1-201ENST00000355653 IGHV5-10-1A0A0J9YXX1 117 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 A0A1W2PQM1 296 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 DLEU1O43261 78 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 NGFP01138 241 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 IRF2P14316 349 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 COX5AP20674 150 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 CCL7P80098 99 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 TMEM14EPQ6UXP3 125 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 LINC01551Q86U37 167 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 GGNQ86UU5 652 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 ZNF709Q8N972 641 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 CCDC74BQ96LY2 380 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 PATZ1Q9HBE1 687 aaKnown RBP12.88□□□□□ -0.35
VAT1-201ENST00000355653 DLL3Q9NYJ7 618 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 TIMM9Q9Y5J7 89 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 VENTXO95231 258 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 G6PCP35575 357 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 LCN2P80188 198 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 WIPI1Q5MNZ9 446 aaPredicted RBP12.88□□□□□ -0.35
VAT1-201ENST00000355653 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 SGMS2Q8NHU3 365 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 ZCCHC14Q8WYQ9 949 aaKnown RBP12.88□□□□□ -0.35
VAT1-201ENST00000355653 PARD6GQ9BYG4 376 aaPredicted RBP12.88□□□□□ -0.35
VAT1-201ENST00000355653 TRAPPC2LQ9UL33 140 aa12.88□□□□□ -0.35
VAT1-201ENST00000355653 IGHV1-45A0A0A0MS14 117 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 SIRPB1O00241 398 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 RAMP3O60896 148 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 NDUFB4O95168 129 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 RFPL3SP0C7P2 107 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 ADMP35318 185 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 ATP5G3P48201 142 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
VAT1-201ENST00000355653 MRPL14Q6P1L8 145 aaKnown RBP12.87□□□□□ -0.35
VAT1-201ENST00000355653 FAM58AQ8N1B3 248 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 WDYHV1Q96HA8 205 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 TMEM147Q9BVK8 224 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 PXMP4Q9Y6I8 212 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 DEGS1O15121 323 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 RBMXL2O75526 392 aaKnown RBP12.87□□□□□ -0.35
VAT1-201ENST00000355653 RHBDL1O75783 438 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 B3GALT5-AS1P59052 145 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 RPS19BP1Q86WX3 136 aaKnown RBP12.87□□□□□ -0.35
VAT1-201ENST00000355653 ZNF114Q8NC26 417 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 OR1L1Q8NH94 360 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 HLA-CQ95604 372 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 ZDHHC16Q969W1 377 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 IMMP2LQ96T52 175 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 TMEM204Q9BSN7 226 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
VAT1-201ENST00000355653 IGHV3-64DA0A0J9YX35 117 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 TOX3O15405 576 aaPredicted RBP12.86□□□□□ -0.35
VAT1-201ENST00000355653 GNB1P62873 340 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
VAT1-201ENST00000355653 GCSAMLQ5JQS6 135 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 TMPRSS7Q7RTY8 843 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 DRAM1Q8N682 238 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 LRP5LA4QPB2 252 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 COLCA1Q6ZS62 124 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 OR5A2Q8NGI9 324 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 PRRG4Q9BZD6 226 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 STRADBQ9C0K7 418 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 ZDHHC11Q9H8X9 412 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
VAT1-201ENST00000355653 TRAV38-1A0A0B4J264 116 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 ZG16O60844 167 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 COX6A1P12074 109 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 CDC34P49427 236 aaPredicted RBP12.85□□□□□ -0.35
VAT1-201ENST00000355653 ZXDAP98168 799 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 RIPPLY2Q5TAB7 128 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 ZNF808Q8N4W9 903 aaPredicted RBP12.85□□□□□ -0.35
VAT1-201ENST00000355653 DIRC2Q96SL1 478 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
VAT1-201ENST00000355653 MLNRO43193 412 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 UMODP07911 640 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 Q6ZWC4 215 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
VAT1-201ENST00000355653 FAM186AA6NE01 2351 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 DMDP11532 3685 aa12.85□□□□□ -0.35
VAT1-201ENST00000355653 M0QZK8 103 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 MRPL33O75394 65 aaKnown RBP12.84□□□□□ -0.35
VAT1-201ENST00000355653 FOXG1P55316 489 aaPredicted RBP12.84□□□□□ -0.35
VAT1-201ENST00000355653 SRYQ05066 204 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 TMEM106BQ9NUM4 274 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 PPP1R14DQ9NXH3 145 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 DOCK7Q96N67 2140 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 USF3Q68DE3 2245 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
VAT1-201ENST00000355653 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.84□□□□□ -0.35
VAT1-201ENST00000355653 RBFOX2O43251 390 aaKnown RBP eCLIP12.84□□□□□ -0.35
VAT1-201ENST00000355653 DNPH1O43598 174 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms