RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 B4E171 279 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 CLDN14O95500 239 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TMEM240Q5SV17 173 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 TCF24Q7RTU0 167 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 NRTNQ99748 197 aa10.99□□□□□ -0.65
SYNCRIP-201ENST00000355238 PGPA6NDG6 321 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 CA7P43166 264 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 RNF7Q9UBF6 113 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 C14orf144Q96I85 54 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 COA4Q9NYJ1 87 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 MSGN1A6NI15 193 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 H7C2G1 150 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 TNFSF15O95150 251 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 SMAGPQ0VAQ4 97 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 PLA2G3Q9NZ20 509 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 MYO9BQ13459 2157 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 SHISA3A0PJX4 238 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 TMPRSS2O15393 492 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 ZNF324O75467 553 aaPredicted RBP10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 CRYBB3P26998 211 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 HYAL1Q12794 435 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 KCNS1Q96KK3 526 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 TRAV14DV4A0A0A6YYC5 116 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 DLL1O00548 723 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.657e-6■□□□□ 8.9
SYNCRIP-201ENST00000355238 HBBP68871 147 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 RCC1LQ96I51 464 aaKnown RBP10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 WFDC6Q9BQY6 131 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 C1RLQ9NZP8 487 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 PCOLCE2Q9UKZ9 415 aa10.98□□□□□ -0.65
SYNCRIP-201ENST00000355238 NUDT3O95989 172 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 GLRX5Q86SX6 157 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 SPEM1Q8N4L4 309 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 FAM169BQ8N8A8 192 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 NEUROG1Q92886 237 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 Q96M66 194 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 WNT10AQ9GZT5 417 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 RPRMQ9NS64 109 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 DTX4Q9Y2E6 619 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 ABCA3Q99758 1704 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 MYF5P13349 255 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 TUSC5Q8IXB3 177 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 OR2I1PQ8NGU4 316 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 SLC25A40Q8TBP6 338 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 SDF2L1Q9HCN8 221 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 SCN4AP35499 1836 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 A0A0G2JK05 382 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 UNC119Q13432 240 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 HES3Q5TGS1 186 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 BIVMQ86UB2 503 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 C9orf40Q8IXQ3 194 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 FAM131CQ96AQ9 280 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 MRPL32Q9BYC8 188 aaKnown RBP10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 LOC390937A0A1W2PQ73 354 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 ZNF576Q9H609 170 aa10.97□□□□□ -0.65
SYNCRIP-201ENST00000355238 TRIP11Q15643 1979 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 NDUFS8O00217 210 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 EIF4EBP2Q13542 120 aaPredicted RBP10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 TMEM52Q8NDY8 209 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 UCN2Q96RP3 112 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 PRDM13Q9H4Q3 707 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 SPCS1Q9Y6A9 102 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 DLEC1Q9Y238 1755 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 MOGAT3Q86VF5 341 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 INSIG2Q9Y5U4 225 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 IZUMO4Q1ZYL8 232 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 DERL1Q9BUN8 251 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 G6PC2Q9NQR9 355 aa10.96□□□□□ -0.65
SYNCRIP-201ENST00000355238 GCHFRP30047 84 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 SAXO1Q8IYX7 474 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF721Q8TF20 911 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 TMEM208Q9BTX3 173 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 LGALS3P17931 250 aaKnown RBP10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 PEBP1P30086 187 aaKnown RBP10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 SFTPA2Q8IWL1 248 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 SFTPA1Q8IWL2 248 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 CLDND2Q8NHS1 167 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 CHRNA10Q9GZZ6 450 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 JKAMPQ9P055 326 aa10.96□□□□□ -0.66
SYNCRIP-201ENST00000355238 ERGP11308 486 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 DEFB109BQ30KR1 87 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 CENPWQ5EE01 88 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 LINC01590Q5TEZ4 76 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 SLC25A47Q6Q0C1 308 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 ZNF414Q96IQ9 312 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 C7orf71A4D174 169 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 C1QTNF9BB2RNN3 333 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 GUSBP11Q6P575 273 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 WNT16Q9UBV4 365 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 A0A1B0GWB2 263 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 BTCP35070 178 aa10.95□□□□□ -0.66
SYNCRIP-201ENST00000355238 GAB4Q2WGN9 574 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms