RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 PRRG2O14669 202 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 RIPPLY3P57055 190 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 LMO7DNF2Z398 122 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 MPZP25189 248 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 ZNF506Q5JVG8 444 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 FAM53AQ6NSI3 398 aaPredicted RBP7.03□□□□□ -1.28
HTT-201ENST00000355072 OR2K2Q8NGT1 345 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 CXXC4Q9H2H0 198 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 TMEM238C9JI98 176 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 GATAD1Q8WUU5 269 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 ISOC2Q96AB3 205 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 COA4Q9NYJ1 87 aa7.03□□□□□ -1.28
HTT-201ENST00000355072 SLC25A20O43772 301 aa7.02□□□□□ -1.28
HTT-201ENST00000355072 HYAL3O43820 417 aaPredicted RBP7.02□□□□□ -1.28
HTT-201ENST00000355072 TMEM25Q86YD3 366 aa7.02□□□□□ -1.28
HTT-201ENST00000355072 CACNG8Q8WXS5 425 aa7.02□□□□□ -1.28
HTT-201ENST00000355072 UBE2FQ969M7 185 aa7.02□□□□□ -1.28
HTT-201ENST00000355072 RNF167Q9H6Y7 350 aa7.02□□□□□ -1.28
HTT-201ENST00000355072 GNG7O60262 68 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 HSD52Q0P140 79 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 SLC25A48Q6ZT89 311 aaKnown RBP7.02□□□□□ -1.29
HTT-201ENST00000355072 COX11Q9Y6N1 276 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 MGAMO43451 1857 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 CD5P06127 495 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 PRICKLE4Q2TBC4 344 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 ZNF430Q9H8G1 570 aaPredicted RBP7.02□□□□□ -1.29
HTT-201ENST00000355072 KCNMB2Q9Y691 235 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 LPAR6P43657 344 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 FOXL1Q12952 345 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 TIMP1P01033 207 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 OTX1P32242 354 aaPredicted RBP7.02□□□□□ -1.29
HTT-201ENST00000355072 BTLAQ7Z6A9 289 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 OR1B1Q8NGR6 318 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 GNB1P62873 340 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 C10orf111Q8N326 155 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 DHHO43323 396 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 IAPPP10997 89 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 PITX1P78337 314 aaPredicted RBP7.02□□□□□ -1.29
HTT-201ENST00000355072 SRSF7Q16629 238 aaKnown RBP eCLIP7.02□□□□□ -1.29
HTT-201ENST00000355072 BCDIN3DQ7Z5W3 292 aaKnown RBP7.02□□□□□ -1.29
HTT-201ENST00000355072 NGFP01138 241 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 IER5LQ5T953 404 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 TMEM40Q8WWA1 233 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 ELSPBP1Q96BH3 223 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 FRRS1LQ9P0K9 344 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 SORL1Q92673 2214 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.02□□□□□ -1.29
HTT-201ENST00000355072 LINC01553A4QN01 128 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 IGHMP01871 453 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 TLNRD1Q9H1K6 362 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 PHLDA3Q9Y5J5 127 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 F8W1H4 67 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 PLPP3O14495 311 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 PGPEP1LA6NFU8 196 aa7.02□□□□□ -1.29
HTT-201ENST00000355072 MRPL18Q9H0U6 180 aaKnown RBP7.02□□□□□ -1.29
HTT-201ENST00000355072 ERVK11-1P61568 191 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 RPL8P62917 257 aaKnown RBP7.01□□□□□ -1.29
HTT-201ENST00000355072 MRPL43Q8N983 215 aaKnown RBP7.01□□□□□ -1.29
HTT-201ENST00000355072 METTL26Q96S19 204 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 ZNF257Q9Y2Q1 563 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 PXMP4Q9Y6I8 212 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 RND3P61587 244 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 GPBAR1Q8TDU6 330 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 HOXA5P20719 270 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 GCSAMQ8N6F7 178 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 OR8A1Q8NGG7 326 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 OR4C13Q8NGP0 309 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 TAF15Q92804 592 aaKnown RBP eCLIP7.01□□□□□ -1.29
HTT-201ENST00000355072 ZNF714Q96N38 554 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 A0A1B0GUT8 65 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 F2Z2F3 143 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 NDUFB3O43676 98 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 ESDP10768 282 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 VKORC1L1Q8N0U8 176 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 OR8I2Q8N0Y5 310 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 SPANXB1Q9NS25 103 aaPredicted RBP7.01□□□□□ -1.29
HTT-201ENST00000355072 FNDC1Q4ZHG4 1894 aaPredicted RBP7.01□□□□□ -1.29
HTT-201ENST00000355072 ATP6V0CP27449 155 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 PTGDSP41222 190 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 PMP22Q01453 160 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 CLLU1OSQ5K130 101 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 LHX8Q68G74 356 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 FBXL14Q8N1E6 418 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 OR51G1Q8NGK1 321 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 MRPL27Q9P0M9 148 aaKnown RBP7.01□□□□□ -1.29
HTT-201ENST00000355072 LY96Q9Y6Y9 160 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 C1orf100Q5SVJ3 147 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 TTC9CQ8N5M4 171 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 CHAC1Q9BUX1 264 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 KIAA1549LQ6ZVL6 1849 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 PLA2G10O15496 165 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 PEX11BO96011 259 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 PRSS36Q5K4E3 855 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 MS4A5Q9H3V2 200 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 CEACAM21Q3KPI0 293 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 PAXXQ9BUH6 204 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 H3BP45 60 aa7.01□□□□□ -1.29
HTT-201ENST00000355072 RSPO2Q6UXX9 243 aaPredicted RBP7.01□□□□□ -1.29
HTT-201ENST00000355072 RSRP1Q9BUV0 290 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms