RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 TESK1Q15569 626 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 TAF9Q16594 264 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 C9orf135Q5VTT2 229 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 AQP3Q92482 292 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 RTBDNQ9BSG5 229 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-203ENST00000354674 RAB18Q9NP72 206 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 VAX2Q9UIW0 290 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 FREM1Q5H8C1 2179 aa8.58□□□□□ -1.04
SYNE1-203ENST00000354674 A0A096LPE4 126 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 A0A1W2PPZ6 126 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 ANOS1P23352 680 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 ARR3P36575 388 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 OCIAD2Q56VL3 154 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 SPSB3Q6PJ21 355 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 ZDHHC22Q8N966 263 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 GPHA2Q96T91 129 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 PROCRQ9UNN8 238 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 CEBPZOSA8MTT3 80 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 H3BP45 60 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 MPIG6BO95866 241 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 AMY2BP19961 511 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 GALR1P47211 349 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 FXYD4P59646 89 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 ARL6IP1Q15041 203 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 GABRA6Q16445 453 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 OR8B12Q8NGG6 310 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 ASB5Q8WWX0 329 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 SPTSSAQ969W0 71 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 IMMP2LQ96T52 175 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 CST9LQ9H4G1 147 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF701Q9NV72 531 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-203ENST00000354674 MEMO1Q9Y316 297 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 DIDO1Q9BTC0 2240 aaKnown RBP8.57□□□□□ -1.04
SYNE1-203ENST00000354674 A0A0U1RQV5 110 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 E9PLN8 166 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 M0R135 149 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 SOCS1O15524 211 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 HNRNPA3P51991 378 aaKnown RBP8.57□□□□□ -1.04
SYNE1-203ENST00000354674 TGFBR3Q03167 851 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 RBPJQ06330 500 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 PHLDA2Q53GA4 152 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 Q6ZWC4 215 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 LYZL2Q7Z4W2 148 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 PINX1Q96BK5 328 aaKnown RBP8.57□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF799Q96GE5 643 aa8.57□□□□□ -1.04
SYNE1-203ENST00000354674 A0A1B0GU03 582 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 LOC107986453A0A1B0GWG9 222 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 SH2D1BO14796 132 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 DEDDO75618 318 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 CTSDP07339 412 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-203ENST00000354674 MELTFP08582 738 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 MEX3BQ6ZN04 569 aaKnown RBP8.56□□□□□ -1.04
SYNE1-203ENST00000354674 HOGA1Q86XE5 327 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 ST6GALNAC6Q969X2 333 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 TMEM204Q9BSN7 226 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 GSX1Q9H4S2 264 aaPredicted RBP8.56□□□□□ -1.04
SYNE1-203ENST00000354674 CDH20Q9HBT6 801 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 HHLA2Q9UM44 414 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 CHD8Q9HCK8 2581 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 PRRX1P54821 245 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 COLCA1Q6ZS62 124 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 CSNK2A3Q8NEV1 391 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 OR13G1Q8NGZ3 307 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 GPR132Q9UNW8 380 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 RNF114Q9Y508 228 aa8.56□□□□□ -1.04
SYNE1-203ENST00000354674 PIEZO2Q9H5I5 2752 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 A0A087WWC5 75 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 C5orf63A6NC05 138 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 F2Z2F3 143 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 F5H5K5 113 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 LILRA1O75019 489 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 SEC11BP0C7V7 166 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 IGFBP3P17936 291 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-203ENST00000354674 FSTP19883 344 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 LY6DQ14210 128 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 TMEM183BQ1AE95 376 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 SLC25A26Q70HW3 274 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF738Q8NE65 137 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 OR5H2Q8NGV7 314 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 LYZL4Q96KX0 146 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 C1QTNF5Q9BXJ0 243 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 SAMD10Q9BYL1 202 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF107Q9UII5 783 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-203ENST00000354674 LAMTOR2Q9Y2Q5 125 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 NBEAQ8NFP9 2946 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 A0A0G2JNJ9 132 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 K7N7A8 449 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 P2RY10O00398 339 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 OPRM1P35372 400 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 P2RY1P47900 373 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 SPATA45Q537H7 98 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF474Q6S9Z5 364 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-203ENST00000354674 FAM57BQ71RH2 274 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 WDR31Q8NA23 367 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 NANOS1Q8WY41 292 aaKnown RBP8.55□□□□□ -1.04
SYNE1-203ENST00000354674 POM121L2Q96KW2 1035 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 OR5B12Q96R08 314 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 VKORC1Q9BQB6 163 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms