RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 KIR2DL5AQ8N109 375 aa9.62□□□□□ -0.87
CAPN9-202ENST00000354537 WDR31Q8NA23 367 aa9.62□□□□□ -0.87
CAPN9-202ENST00000354537 DEPPQ9NTK1 212 aa9.62□□□□□ -0.87
CAPN9-202ENST00000354537 KCNIP1Q9NZI2 227 aa9.62□□□□□ -0.87
CAPN9-202ENST00000354537 TMEM210A6NLX4 147 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 C11orf94C9JXX5 98 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 WDR1O75083 606 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 CCL2P13500 99 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 YPEL3P61236 119 aaPredicted RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 PPP1CBP62140 327 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 LINC01551Q86U37 167 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 OR1K1Q8NGR3 316 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 ZNF576Q9H609 170 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 SH2D1BO14796 132 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 CLDN14O95500 239 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 OR2H2O95918 312 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 PDGFBP01127 241 aaPredicted RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 IGHV3-9P01782 118 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 SNRPCP09234 159 aaKnown RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 IL3RAP26951 378 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 LHX2P50458 406 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 DUSP3P51452 185 aaPredicted RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 UBE2NP61088 152 aaKnown RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 HLA-BQ31612 363 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 NUFIP2Q7Z417 695 aaKnown RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 DTD1Q8TEA8 209 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 GMPPAQ96IJ6 420 aaPredicted RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 WASF3Q9UPY6 502 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 TRAPPC1Q9Y5R8 145 aa9.61□□□□□ -0.87
CAPN9-202ENST00000354537 ASCC3Q8N3C0 2202 aaKnown RBP9.61□□□□□ -0.87
CAPN9-202ENST00000354537 A0A1W2PR80 420 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 ZNF503-AS2A6NEH8 195 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 RAB4AP20338 218 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 CDC34P49427 236 aaPredicted RBP9.6□□□□□ -0.87
CAPN9-202ENST00000354537 Q0VFX4 171 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 RTP5Q14D33 572 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 IGFBP7Q16270 282 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 FAM180AQ6UWF9 173 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 TUSC5Q8IXB3 177 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 APH1AQ96BI3 265 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 TAAR6Q96RI8 345 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 ODAMA1E959 279 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 MPDU1O75352 247 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 RHBDL1O75783 438 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 OR4A8P0C604 315 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 ESDP10768 282 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 RAC2P15153 192 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 NPPCP23582 126 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 CLDN18P56856 261 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 SOX8P57073 446 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 PAFAH1B2P68402 229 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 R3HDM4Q96D70 268 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 FAM173AQ9BQD7 235 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 B4GALT7Q9UBV7 327 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 NAGKQ9UJ70 344 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 MYO9BQ13459 2157 aa9.6□□□□□ -0.87
CAPN9-202ENST00000354537 PINLYPA6NC86 204 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 GDF9O60383 454 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 CCL4P13236 92 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 WNT5AP41221 380 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 SELENOTP62341 195 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 SSPNQ14714 243 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 AARDQ4LEZ3 155 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 FAM78BQ5VT40 261 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 GATAD1Q8WUU5 269 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 NANOS1Q8WY41 292 aaKnown RBP9.59□□□□□ -0.87
CAPN9-202ENST00000354537 GP6Q9HCN6 339 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 PPP1R14DQ9NXH3 145 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 A0A0U1RQK1 487 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 A0A1B0GWJ7 208 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 TMEM30CPA0ZSE6 113 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 ZNF320A2RRD8 509 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 FAM90A9PA6NNJ1 464 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 SIRPB1O00241 398 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 EREGO14944 169 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 CRYABP02511 175 aaKnown RBP9.59□□□□□ -0.87
CAPN9-202ENST00000354537 CA6P23280 308 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 SLC35E4Q6ICL7 350 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 FIP1L1Q6UN15 594 aaKnown RBP9.59□□□□□ -0.87
CAPN9-202ENST00000354537 GALMQ96C23 342 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 SNHG12Q9BXW3 62 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 CLN8Q9UBY8 286 aa9.59□□□□□ -0.87
CAPN9-202ENST00000354537 CEP290O15078 2479 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 ZNF891A8MT65 544 aaPredicted RBP9.58□□□□□ -0.88
CAPN9-202ENST00000354537 SCGB1D1O95968 90 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 GNB1P62873 340 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 RPP30P78346 268 aaKnown RBP9.58□□□□□ -0.88
CAPN9-202ENST00000354537 TFF3Q07654 80 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 GABRA6Q16445 453 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 SCCPDHQ8NBX0 429 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 FAM216AQ8WUB2 273 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 TMEM68Q96MH6 324 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 TMEM204Q9BSN7 226 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 ELOVL5Q9NYP7 299 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 PILRBQ9UKJ0 227 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 TNRC18O15417 2968 aaPredicted RBP9.58□□□□□ -0.88
CAPN9-202ENST00000354537 OOEPA6NGQ2 149 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 HMGB3O15347 200 aaKnown RBP9.58□□□□□ -0.88
CAPN9-202ENST00000354537 LILRA1O75019 489 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms