RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 A6NDX4 124 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 LDLRAD4O15165 306 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 ZNF823P16415 610 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 RPS27P42677 84 aaKnown RBP8.99□□□□□ -0.97
RTN3-204ENST00000354497 CEBPGP53567 150 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 CRISP1P54107 249 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 BLCAPP62952 87 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 MXD1Q05195 221 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 GFOD2Q3B7J2 385 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 CASC10Q5T4H9 136 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 DYNAPQ8N1N2 210 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 HIST3H2BBQ8N257 126 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 ZNF485Q8NCK3 441 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 NMNAT3Q96T66 252 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 FEVQ99581 238 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 ZNF649Q9BS31 505 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 SNHG12Q9BXW3 62 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 AMBNQ9NP70 447 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 ABRACLQ9P1F3 81 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 OR52A1Q9UKL2 312 aa8.99□□□□□ -0.97
RTN3-204ENST00000354497 UNC119BA6NIH7 251 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 FFAR1O14842 300 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 PPP1R2P9O14990 202 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 ZNF682O95780 498 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 ANXA2P07355 339 aaKnown RBP8.98□□□□□ -0.97
RTN3-204ENST00000354497 PSMB6P28072 239 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 CAV3P56539 151 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 VAMP2P63027 116 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 SELENOWP63302 87 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 RAB40BQ12829 278 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 UNQ9370/PRO34162Q6UXP9 181 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 DPY19L2P2Q6ZN68 376 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 VTCN1Q7Z7D3 282 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 ZNRF1Q8ND25 227 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 CCDC54Q8NEL0 328 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 OR4X2Q8NGF9 303 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 OR4K13Q8NH42 304 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 MUC7Q8TAX7 377 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 CLCC1Q96S66 551 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 MICU1Q9BPX6 476 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 CACFD1Q9UGQ2 172 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 SIGLEC7Q9Y286 467 aa8.98□□□□□ -0.97
RTN3-204ENST00000354497 A0A1W2PPH5 198 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 TMEM238C9JI98 176 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 TNFRSF11BO00300 401 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 XRCC2O43543 280 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 NDUFB6O95139 128 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 SPDEFO95238 335 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 TXNDC12O95881 172 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 CD74P04233 296 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 ARG1P05089 322 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 NPSP0C0P6 89 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 HLA-GP17693 338 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 OR10A3P58181 314 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 ERVFRD-1P60508 538 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 ERVFC1-1P60608 527 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 DGCR2P98153 550 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 PPP1R8Q12972 351 aaKnown RBP8.97□□□□□ -0.97
RTN3-204ENST00000354497 KIAA0141Q14154 515 aaPredicted RBP8.97□□□□□ -0.97
RTN3-204ENST00000354497 PTGES3Q15185 160 aaKnown RBP8.97□□□□□ -0.97
RTN3-204ENST00000354497 TMEM241Q24JQ0 296 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 AKIRIN2Q53H80 203 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 TCTEX1D4Q5JR98 221 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 LEMD1Q68G75 181 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 HEPN1Q6WQI6 88 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 ACOT7LQ6ZUV0 252 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 BAP18Q8IXM2 172 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 OR10D4PQ8NGN7 298 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 OR4A4PQ8NGN8 299 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 ABHD1Q96SE0 405 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 GPX7Q96SL4 187 aaPredicted RBP8.97□□□□□ -0.97
RTN3-204ENST00000354497 RTL8AQ9BWD3 113 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 SMDT1Q9H4I9 107 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 CENPMQ9NSP4 180 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 TNFSF18Q9UNG2 199 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 TVP23AA6NH52 213 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 EREGO14944 169 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 SYT7O43581 403 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 CTXN2P0C2S0 81 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 RD3LP0DJH9 198 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 HIST1H1CP16403 213 aaKnown RBP8.97□□□□□ -0.97
RTN3-204ENST00000354497 GLRA1P23415 457 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 DTYMKP23919 212 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 SELENOTP62341 195 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 FABP5Q01469 135 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 SPIBQ01892 262 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 RAB12Q6IQ22 244 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 SMARCD3Q6STE5 483 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 SLC16A9Q7RTY1 509 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 MRPL41Q8IXM3 137 aaKnown RBP8.97□□□□□ -0.97
RTN3-204ENST00000354497 OR2AK2Q8NG84 335 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 REEP6Q96HR9 211 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 HSH2DQ96JZ2 352 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 MRPL22Q9NWU5 206 aaKnown RBP8.97□□□□□ -0.97
RTN3-204ENST00000354497 DOK5Q9P104 306 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 ZFP30Q9Y2G7 519 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 RHBDD3Q9Y3P4 386 aa8.97□□□□□ -0.97
RTN3-204ENST00000354497 FXYD6-FXYD2A0A087WZ82 144 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms