RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HS3ST6Q96QI5 342 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 CD300LBA8K4G0 201 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 IGKV1-39P01597 117 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 IGKV1D-39P04432 117 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 ZNF32P17041 273 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 PMP22Q01453 160 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 LINC01551Q86U37 167 aa15.8■□□□□ 0.12
SCARF1-202ENST00000348987 BMP5P22003 454 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 LINC00310P59036 64 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 TPPP2P59282 170 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 SLC38A11Q08AI6 406 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 NEIL1Q96FI4 390 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-202ENST00000348987 WNT5BQ9H1J7 359 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 LNP1A1A4G5 178 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 PGPEP1LA6NFU8 196 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 NAPSAO96009 420 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 C1QTNF9P0C862 333 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 B3GALT5-AS1P59052 145 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 RANP62826 216 aaKnown RBP15.79■□□□□ 0.12
SCARF1-202ENST00000348987 RBX1P62877 108 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 IL11RAQ14626 422 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 AGBL5Q8NDL9 886 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 OR10G9Q8NGN4 311 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 OR10G7Q8NGN6 311 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 SGMS2Q8NHU3 365 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 SLC35E1Q96K37 410 aa15.79■□□□□ 0.12
SCARF1-202ENST00000348987 RYDENQ9NUL5 291 aaKnown RBP15.79■□□□□ 0.12
SCARF1-202ENST00000348987 CTXND1A0A1B0GTU2 59 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 MLNRO43193 412 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 IGHV3-9P01782 118 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 SLC25A6P12236 298 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 MPLP40238 635 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 COTL1Q14019 142 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 Q6ZS49 121 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 CIB3Q96Q77 187 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-202ENST00000348987 MSL2Q9HCI7 577 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 IL36RNQ9UBH0 155 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 BDP1A6H8Y1 2624 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 KNTC1P50748 2209 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 FREM1Q5H8C1 2179 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 CRYAAP02489 173 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 WNT2P09544 360 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 OR1F12Q8NHA8 337 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 ZDHHC11Q9H8X9 412 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 ELOVL5Q9NYP7 299 aa15.78■□□□□ 0.12
SCARF1-202ENST00000348987 NCKAP5O14513 1909 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 C11orf94C9JXX5 98 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 CXCL13O43927 109 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 CBR3O75828 277 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 SERF1AO75920 110 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 PAFAH1B2P68402 229 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 PSG4Q00888 419 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 GGNQ86UU5 652 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 DERL1Q9BUN8 251 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 TMEM38BQ9NVV0 291 aa15.77■□□□□ 0.12
SCARF1-202ENST00000348987 LOC400499M0QZD8 3231 aa15.77■□□□□ 0.11
SCARF1-202ENST00000348987 IGKV1-5P01602 117 aa15.77■□□□□ 0.11
SCARF1-202ENST00000348987 BCL3P20749 454 aa15.77■□□□□ 0.11
SCARF1-202ENST00000348987 TRIM61Q5EBN2 209 aa15.77■□□□□ 0.11
SCARF1-202ENST00000348987 OR2Y1Q8NGV0 311 aa15.77■□□□□ 0.11
SCARF1-202ENST00000348987 ERRFI1Q9UJM3 462 aaPredicted RBP15.77■□□□□ 0.11
SCARF1-202ENST00000348987 C20orf202A1L168 122 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 ZNF716A6NP11 495 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 CLDN15P56746 228 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 CARD18P57730 90 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 RAC3P60763 192 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 FOXL1Q12952 345 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 SLC23A3Q6PIS1 610 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 PCSK4Q6UW60 755 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 STPG4Q8N801 248 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 ZNF114Q8NC26 417 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 CCL25O15444 150 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 NDUFB8O95169 186 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 S100GP29377 79 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 COMPP49747 757 aaPredicted RBP15.76■□□□□ 0.11
SCARF1-202ENST00000348987 Q0VFX4 171 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 OR5AU1Q8NGC0 362 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 ATP23Q9Y6H3 246 aa15.76■□□□□ 0.11
SCARF1-202ENST00000348987 KIR2DS1A0A191URI9 304 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 HS3ST1O14792 307 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 KIR2DS4P43632 304 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 KIR2DS1Q14954 304 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 CEACAM16Q2WEN9 425 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 WIPI1Q5MNZ9 446 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-202ENST00000348987 SAPCD1Q5SSQ6 148 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 C20orf204Q6ZNR8 217 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 TECTAO75443 2155 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 ZNF407Q9C0G0 2248 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 ZNF16P17020 682 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-202ENST00000348987 CBLN1P23435 193 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 MSMO1Q15800 293 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 FFAR4Q5NUL3 377 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 UBALD2Q8IYN6 164 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 ABHD3Q8WU67 409 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 PARD6GQ9BYG4 376 aaPredicted RBP15.75■□□□□ 0.11
SCARF1-202ENST00000348987 RNF114Q9Y508 228 aa15.75■□□□□ 0.11
SCARF1-202ENST00000348987 hCG_38984A0A1B0GV85 526 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 OR6C6A6NF89 314 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 F2Z2F3 143 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 RBFOX2O43251 390 aaKnown RBP eCLIP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms