RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RND1Q92730 232 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 GNPNAT1Q96EK6 184 aaPredicted RBP16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 C14orf79Q96F83 325 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 SEC11CQ9BY50 192 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 NKX6-2Q9C056 277 aaPredicted RBP16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 OR6C3Q9NZP0 311 aa16.93■□□□□ 0.3
CHRNA3-202ENST00000348639 C17orf98A8MV24 154 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 UMAD1C9J7I0 102 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 H3BP45 60 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 F2RL2O00254 374 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 C1QL1O75973 258 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 DFFBO76075 338 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 DVL1P1P54792 670 aaPredicted RBP16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 EDDM3BP56851 147 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 ZNF816Q0VGE8 651 aaPredicted RBP16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 MORN2Q502X0 79 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 OR2B11Q5JQS5 317 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 OR2G3Q8NGZ4 309 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 SDSLQ96GA7 329 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 PSENENQ9NZ42 101 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 GNG12Q9UBI6 72 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 TRGV8A0A0C4DH27 118 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 YPEL1O60688 119 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 KRASP01116 189 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 SNCAP37840 140 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 BSPH1Q075Z2 132 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 LTC4SQ16873 150 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 Q3ZCU0 254 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 STUMQ69YW2 141 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 YPEL2Q96QA6 119 aa16.92■□□□□ 0.3
CHRNA3-202ENST00000348639 ATXN7O15265 892 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 S1PR2O95136 353 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 IAPPP10997 89 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 G6PCP35575 357 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 LOXL3P58215 753 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 TMEM267Q0VDI3 215 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 ADIPOQQ15848 244 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 KCNJ16Q9NPI9 418 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 LAMP3Q9UQV4 416 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 LINC00473A8K010 186 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 CYB5R3P00387 301 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 CGB3P0DN86 165 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 CGB7P0DN87 165 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 ZNF273Q14593 569 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 GUCA2BQ16661 112 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 DIRC2Q96SL1 478 aa16.91■□□□□ 0.3
CHRNA3-202ENST00000348639 ZZEF1O43149 2961 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 CLDN14O95500 239 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 OR4A8P0C604 315 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 GPR12P47775 334 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 UBE2KP61086 200 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 TNFRSF9Q07011 255 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 PUSL1Q8N0Z8 303 aaKnown RBP16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 CALYQ9NYX4 217 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 HSPB7Q9UBY9 170 aa16.9■□□□□ 0.3
CHRNA3-202ENST00000348639 SELLP14151 372 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 FAM213BQ8TBF2 198 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 CD300LFQ8TDQ1 290 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 RAB9BQ9NP90 201 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 RFNGQ9Y644 331 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 KALRNO60229 2985 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 FAM157AC9JC47 383 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 CD55P08174 381 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 IRF2P14316 349 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 ADAM5Q6NVV9 412 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 WFIKKN1Q96NZ8 548 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 GAFA1Q96PS6 74 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 VKORC1Q9BQB6 163 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 USF3Q68DE3 2245 aa16.89■□□□□ 0.29
CHRNA3-202ENST00000348639 LRRC30A6NM36 301 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 DNASE2O00115 360 aaPredicted RBP16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 RAB29O14966 203 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 PROP1O75360 226 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 IFNA5P01569 189 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 SFTA3P0C7M3 94 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 TNFRSF1AP19438 455 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 DUTP33316 252 aaKnown RBP16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 TAGLNQ01995 201 aaKnown RBP16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 TEX36Q5VZQ5 186 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 FAM234AQ9H0X4 552 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 ZNF665Q9H7R5 613 aa16.88■□□□□ 0.29
CHRNA3-202ENST00000348639 C17orf100A8MU93 164 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 C9JQL5 133 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 TSPAN4O14817 238 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 METTL15P1P0C7V9 234 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 LINC00205P59089 165 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 CCL8P80075 99 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 C17orf58Q2M2W7 97 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 ZNF788Q6ZQV5 615 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 C17orf50Q8WW18 174 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 FAM122AQ96E09 287 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 SCRT1Q9BWW7 348 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 RBKSQ9H477 322 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 DSCAMO60469 2012 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 ITGB1BP1O14713 200 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 HBG1P69891 147 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 HBG2P69892 147 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 RUNX1Q01196 453 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 NCR3LG1Q68D85 454 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms