RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ZNF703Q9H7S9 590 aaPredicted RBP13.01□□□□□ -0.33
LMNA-201ENST00000347559 IL36GQ9NZH8 169 aa13.01□□□□□ -0.33
LMNA-201ENST00000347559 TBL2Q9Y4P3 447 aaKnown RBP13.01□□□□□ -0.33
LMNA-201ENST00000347559 G3V3Y1 287 aa13□□□□□ -0.33
LMNA-201ENST00000347559 CDKN1BP46527 198 aa13□□□□□ -0.33
LMNA-201ENST00000347559 FASLGP48023 281 aa13□□□□□ -0.33
LMNA-201ENST00000347559 PCSK4Q6UW60 755 aa13□□□□□ -0.33
LMNA-201ENST00000347559 RNF2Q99496 336 aa13□□□□□ -0.33
LMNA-201ENST00000347559 SLC45A2Q9UMX9 530 aa13□□□□□ -0.33
LMNA-201ENST00000347559 LRP4O75096 1905 aa13□□□□□ -0.33
LMNA-201ENST00000347559 A0A1B0GX78 115 aa13□□□□□ -0.33
LMNA-201ENST00000347559 SYNGR3O43761 229 aa13□□□□□ -0.33
LMNA-201ENST00000347559 PTGDSP41222 190 aa13□□□□□ -0.33
LMNA-201ENST00000347559 CDC34P49427 236 aaPredicted RBP13□□□□□ -0.33
LMNA-201ENST00000347559 GPM6AP51674 278 aa13□□□□□ -0.33
LMNA-201ENST00000347559 AARDQ4LEZ3 155 aa13□□□□□ -0.33
LMNA-201ENST00000347559 RABEPKQ7Z6M1 372 aa13□□□□□ -0.33
LMNA-201ENST00000347559 KMT5CQ86Y97 462 aa13□□□□□ -0.33
LMNA-201ENST00000347559 C1orf174Q8IYL3 243 aa13□□□□□ -0.33
LMNA-201ENST00000347559 OR10G8Q8NGN5 311 aa13□□□□□ -0.33
LMNA-201ENST00000347559 OR1L1Q8NH94 360 aa13□□□□□ -0.33
LMNA-201ENST00000347559 ORAOV1Q8WV07 137 aa13□□□□□ -0.33
LMNA-201ENST00000347559 SNURFLB1AK76 121 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 M0QZ24 198 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 PIAS2O75928 621 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 IGHEP01854 428 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 YPEL3P61236 119 aaPredicted RBP12.99□□□□□ -0.33
LMNA-201ENST00000347559 PSG4Q00888 419 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 RAET1LQ5VY80 246 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 RHBDD2Q6NTF9 364 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 RLN3Q8WXF3 142 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 TMEM54Q969K7 222 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 VPS25Q9BRG1 176 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 LRFN3Q9BTN0 628 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 UBE2ZQ9H832 354 aaPredicted RBP12.99□□□□□ -0.33
LMNA-201ENST00000347559 TRBV20OR9-2A0A075B6H5 130 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 OR6C6A6NF89 314 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 CTXN2P0C2S0 81 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 MYF5P13349 255 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 BPIFB3P59826 476 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 SLC25A53Q5H9E4 307 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 FAM27BQ5VT28 67 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 TMEM42Q69YG0 159 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 ZNF488Q96MN9 340 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 hCG_38984A0A1B0GV85 526 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 RBMXL2O75526 392 aaKnown RBP12.99□□□□□ -0.33
LMNA-201ENST00000347559 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 SLC25A6P12236 298 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 PARD6GQ9BYG4 376 aaPredicted RBP12.99□□□□□ -0.33
LMNA-201ENST00000347559 NRN1Q9NPD7 142 aa12.99□□□□□ -0.33
LMNA-201ENST00000347559 TRIOO75962 3097 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 YLPM1P49750 1951 aaKnown RBP12.98□□□□□ -0.33
LMNA-201ENST00000347559 CD99P14209 185 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 MAJINQ3KP22 176 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 SAXO1Q8IYX7 474 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 ZNF738Q8NE65 137 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 TIMM9Q9Y5J7 89 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 ZNF324BQ6AW86 544 aaPredicted RBP12.98□□□□□ -0.33
LMNA-201ENST00000347559 ANKRD37Q7Z713 158 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 OR10P1Q8NGE3 313 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 OCC1Q8TAD7 63 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 TMEM147Q9BVK8 224 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 GNB4Q9HAV0 340 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 FGF21Q9NSA1 209 aa12.98□□□□□ -0.33
LMNA-201ENST00000347559 LOC105371242A0A075B767 164 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 LILRA5A6NI73 299 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 GDF9O60383 454 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 NXPH2O95156 264 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 EDDM3BP56851 147 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 SLC35B1P78383 322 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 ZXDAP98168 799 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 HLA-DRB5Q30154 266 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 FGFBP3Q8TAT2 258 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 LSM10Q969L4 123 aaKnown RBP12.97□□□□□ -0.33
LMNA-201ENST00000347559 APOBEC3DQ96AK3 386 aaPredicted RBP12.97□□□□□ -0.33
LMNA-201ENST00000347559 NPCDR1Q9BY65 106 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 LOC102724200A0A096LPH7 203 aaPredicted RBP12.97□□□□□ -0.33
LMNA-201ENST00000347559 PDE6DO43924 150 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 GPX1P07203 203 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 NTF3P20783 257 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 CLDN15P56746 228 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 ZNF585BQ52M93 769 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 A0A1W2PPV4 95 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 VAMP3Q15836 100 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 FAM19A2Q8N3H0 131 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 FGFRL1Q8N441 504 aa12.97□□□□□ -0.33
LMNA-201ENST00000347559 SCO2A0A1W2PP80 73 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 TRAPPC2LH3BP13 241 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 CTRLP40313 264 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 KIAA0895LQ68EN5 471 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 TMEM14EPQ6UXP3 125 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 Q6ZS49 121 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 Q8N976 141 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 NFAM1Q8NET5 270 aaPredicted RBP12.96□□□□□ -0.33
LMNA-201ENST00000347559 OR56B2PQ8NGI1 322 aa12.96□□□□□ -0.33
LMNA-201ENST00000347559 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms