RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 LIAT1Q6ZQX7 453 aa13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 LYG1Q8N1E2 194 aa13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 LRTM2Q8N967 370 aa13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 OR51H1Q8NH63 302 aa13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 ZNF251Q9BRH9 671 aa13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 METTL8Q9H825 291 aaKnown RBP13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 ZNRD1Q9P1U0 126 aa13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 KPTNQ9Y664 436 aa13.34□□□□□ -0.27
CEACAM1-202ENST00000344391 A0A096LNT2 108 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 SAA2-SAA4A0A096LPE2 208 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 IGHV2-26A0A0B4J1V2 119 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 RNF212BA8MTL3 300 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 GOSR2O14653 212 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 SAA2P0DJI9 122 aaPredicted RBP13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 PRTN3P24158 256 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 UCP1P25874 307 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 DLX1P56177 255 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 RPL30P62888 115 aaKnown RBP13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 CD83Q01151 205 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 Q5PR19 223 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 PRSS57Q6UWY2 283 aa13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 HSD17B10Q99714 261 aaKnown RBP13.33□□□□□ -0.28
CEACAM1-202ENST00000344391 DUTP33316 252 aaKnown RBP13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 TNFRSF14Q92956 283 aa13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 ZNF436Q9C0F3 470 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 SIRPDQ9H106 197 aa13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 UNKLQ9H9P5 680 aaKnown RBP13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 RANGRFQ9HD47 186 aaPredicted RBP13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 LIN7CQ9NUP9 197 aaKnown RBP13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
CEACAM1-202ENST00000344391 LINC00473A8K010 186 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 M0R1X1 148 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 SIX6O95475 246 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 CDS2O95674 445 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 IGLV1-47P01700 117 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 ZNF16P17020 682 aaPredicted RBP13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 SRPXP78539 464 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 PRB3Q04118 309 aaPredicted RBP13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 CATR1Q13166 79 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 KRTAP1-3Q8IUG1 177 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 LGI3Q8N145 548 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 OR5M8Q8NGP6 311 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 FYTTD1Q96QD9 318 aaKnown RBP13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 LPAR2Q9HBW0 351 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 RAB18Q9NP72 206 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 SIRT7Q9NRC8 400 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 CSMD1Q96PZ7 3565 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 CCSO14618 274 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 TOR1AO14656 332 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 ADAP1O75689 374 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 OR2A4O95047 310 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 DVL1P1P54792 670 aaPredicted RBP13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 PRRX1P54821 245 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 H2BFSP57053 126 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 LINC00205P59089 165 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 ZNF833PQ6ZTB9 187 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 TCTEX1D1Q8N7M0 179 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 BEND2Q8NDZ0 799 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 OR13D1Q8NGV5 346 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 OR10X1Q8NGY0 326 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 TCTEX1D2Q8WW35 142 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 C1orf159Q96HA4 380 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 C18orf12Q96KH6 178 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 OR2A7Q96R45 310 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 S1PR3Q99500 378 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 INSIG2Q9Y5U4 225 aa13.31□□□□□ -0.28
CEACAM1-202ENST00000344391 HOXB5P09067 269 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 MMP9P14780 707 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 COX7A1P24310 79 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 ZNF137PP52743 207 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 BRWD1-AS2P59051 145 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 HLA-DRB5Q30154 266 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 ZNF585BQ52M93 769 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 DCAF12L2Q5VW00 463 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 TMEM268Q5VZI3 342 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 NCR3LG1Q68D85 454 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 HCP5Q6MZN7 132 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 VMO1Q7Z5L0 202 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 SELENOHQ8IZQ5 122 aaKnown RBP13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 PNKDQ8N490 385 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 DRAXINQ8NBI3 349 aaPredicted RBP13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 OR11H6Q8NGC7 330 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 ST6GALNAC6Q969X2 333 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 PPP1R14BQ96C90 147 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 HEXA-AS1Q9H8Q6 139 aa13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 FAM212BQ9NTI7 297 aaPredicted RBP13.3□□□□□ -0.28
CEACAM1-202ENST00000344391 SERPINE2P07093 398 aa13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 GIPP09681 153 aaPredicted RBP13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 LOXL1Q08397 574 aaPredicted RBP13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 LYZL2Q7Z4W2 148 aa13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 ZNF695Q8IW36 515 aa13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 TCTE3Q8IZS6 198 aa13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 TMEM186Q96B77 213 aa13.29□□□□□ -0.28
CEACAM1-202ENST00000344391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.29□□□□□ -0.282e-10■■■■□ 22.3
CEACAM1-202ENST00000344391 THBS3P49746 956 aa13.28□□□□□ -0.28
CEACAM1-202ENST00000344391 PAX8Q06710 450 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms