RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 FOXD3Q9UJU5 478 aaPredicted RBP11.89□□□□□ -0.51
TRIO-202ENST00000344204 OPRK1P41145 380 aa11.89□□□□□ -0.51
TRIO-202ENST00000344204 ZNF766Q5HY98 468 aa11.89□□□□□ -0.51
TRIO-202ENST00000344204 KLHDC2Q9Y2U9 406 aa11.89□□□□□ -0.51
TRIO-202ENST00000344204 GZMBP10144 247 aa11.89□□□□□ -0.51
TRIO-202ENST00000344204 MUC15Q8N387 334 aa11.89□□□□□ -0.51
TRIO-202ENST00000344204 BAHD1Q8TBE0 780 aaPredicted RBP11.89□□□□□ -0.51
TRIO-202ENST00000344204 A0A1W2PNR3 127 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 PDCD1Q15116 288 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 LINC00615Q96LM1 132 aaPredicted RBP11.88□□□□□ -0.51
TRIO-202ENST00000344204 RTP5Q14D33 572 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 ROM1Q03395 351 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 LINC01465Q8N7H1 131 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 STXBP6Q8NFX7 210 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 H7C2G1 150 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 RELBQ01201 579 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIO-202ENST00000344204 ZNF48Q96MX3 618 aaPredicted RBP11.88□□□□□ -0.51
TRIO-202ENST00000344204 A0A1B0GW64 132 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 TNFSF15O95150 251 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 M0R296 226 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 FNDC7Q5VTL7 733 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 A0A1W2PPE3 182 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 APOMO95445 188 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 ABHD3Q8WU67 409 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 UBE2ZQ9H832 354 aaPredicted RBP11.88□□□□□ -0.51
TRIO-202ENST00000344204 A0A0G2JK05 382 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 H3BUT2 72 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 ZNF664Q8N3J9 261 aa11.88□□□□□ -0.51
TRIO-202ENST00000344204 CA3P07451 260 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 METAP1P53582 386 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 RHBDD1Q8TEB9 315 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 MPDU1O75352 247 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 OR2T8A6NH00 312 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 MSGN1A6NI15 193 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 RUNX2Q13950 521 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 GDF15Q99988 308 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 TMEM242Q9NWH2 141 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 TBC1D29Q9UFV1 150 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 RPS15P62841 145 aaKnown RBP11.87□□□□□ -0.51
TRIO-202ENST00000344204 ZNF355PQ9NSJ1 428 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 MPZP25189 248 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 CDKN1BP46527 198 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 UCP3P55916 312 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
TRIO-202ENST00000344204 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 FLRT3Q9NZU0 649 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 ACRP10323 421 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 PMELP40967 661 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 PSG2P11465 335 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 OR1D5P58170 312 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 TWIST1Q15672 202 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 FAM174AQ8TBP5 190 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 PSG11Q9UQ72 335 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 LY6G6FQ5SQ64 297 aa11.87□□□□□ -0.51
TRIO-202ENST00000344204 MPZL1O95297 269 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 ZNF324BQ6AW86 544 aaPredicted RBP11.86□□□□□ -0.51
TRIO-202ENST00000344204 C2CD3Q4AC94 2353 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 MEOX1P50221 254 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 DUSP3P51452 185 aaPredicted RBP11.86□□□□□ -0.51
TRIO-202ENST00000344204 FOXF1Q12946 379 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 PRICKLE4Q2TBC4 344 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 IL36RNQ9UBH0 155 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
TRIO-202ENST00000344204 DCDP81605 110 aaKnown RBP11.86□□□□□ -0.51
TRIO-202ENST00000344204 SPACA9Q96E40 222 aaPredicted RBP11.86□□□□□ -0.51
TRIO-202ENST00000344204 SLC25A33Q9BSK2 321 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 AREGP15514 252 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 A0A096LPE4 126 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 A0A1W2PPZ6 126 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 TMEM262E9PQX1 116 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 COX6CP09669 75 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 CA6P23280 308 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 ACP1P24666 158 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 TRA2AQ13595 282 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRIO-202ENST00000344204 RTN4RQ9BZR6 473 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 CCL28Q9NRJ3 127 aa11.86□□□□□ -0.51
TRIO-202ENST00000344204 S100A4P26447 101 aaKnown RBP11.86□□□□□ -0.51
TRIO-202ENST00000344204 A0A1B0GX78 115 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 M0QZ24 198 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 RUNX3Q13761 415 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 LINC00596Q86U02 117 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 TRAV30A0A087WSZ9 112 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 PSG1P11464 419 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 GAGE12BA1L429 117 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 PIGYQ3MUY2 71 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 C1QTNF9BB2RNN3 333 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 FCGR3AP08637 254 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 CXCL1P09341 107 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 DLX1P56177 255 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 H0YIG0 161 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 SRSF5Q13243 272 aaKnown RBP11.85□□□□□ -0.51
TRIO-202ENST00000344204 A0A1B0GW15 77 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 SELENOTP62341 195 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 OR4X2Q8NGF9 303 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 WDR54Q9H977 334 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms