RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 NDUFB7P17568 137 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 GABRA6Q16445 453 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 C10orf113Q5VZT2 155 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 PQLC2Q6ZP29 291 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 SLC22A18ASQ8N1D0 253 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR4C12Q96R67 309 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 EGLN1Q9GZT9 426 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 CHODLQ9H9P2 273 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 ZFP30Q9Y2G7 519 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 TET1Q8NFU7 2136 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV3-64DA0A0J9YX35 117 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 H0YIZ8 118 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 LYPD3O95274 346 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 SOD3P08294 240 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 COL8A1P27658 744 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 ERVFRD-1P60508 538 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 SUPT4H1P63272 117 aaKnown RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 SRSF7Q16629 238 aaKnown RBP eCLIP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 MRGPRDQ8TDS7 321 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 SMIM12Q96EX1 92 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF385AQ96PM9 386 aaKnown RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 PRNDQ9UKY0 176 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 PDE4DIPQ5VU43 2346 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 GPX4P36969 197 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 CLDN18P56856 261 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 GAL3ST2Q9H3Q3 398 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 FOXJ2Q9P0K8 574 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 DEFB108AA8MXU0 73 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 RIGQ13278 110 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 CYB5R2Q6BCY4 276 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 LRTM2Q8N967 370 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM45BQ96B21 275 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 KCNS1Q96KK3 526 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV1OR15-9A0A0B4J2B8 117 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 MARCH11A6NNE9 402 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 LDLRAD4O15165 306 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 MDKP21741 143 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 ICAM4Q14773 271 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR4D5Q8NGN0 318 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 IER2Q9BTL4 223 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 TWSG1Q9GZX9 223 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 IL36BQ9NZH7 164 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 LYG1Q8N1E2 194 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR4X1Q8NH49 305 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 CDIPTO14735 213 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR4F17Q8NGA8 305 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR2T6Q8NHC8 308 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 GTF3AQ92664 365 aaKnown RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 SEBOXQ9HB31 216 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 GPR35Q9HC97 309 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 RPRMQ9NS64 109 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 RHBDL1O75783 438 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 NEURL1O76050 574 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 RPL23P62829 140 aaKnown RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM251Q8N6I4 163 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 OR10S1Q8NGN2 331 aa4.12□□□□□ -1.75
CSMD3-203ENST00000343508 ZNF501Q96CX3 271 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-203ENST00000343508 RAB29O14966 203 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CRYABP02511 175 aaKnown RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CCL1P22362 96 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 ACP1P24666 158 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 ARTNQ5T4W7 220 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 SLC23A3Q6PIS1 610 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 UCN2Q96RP3 112 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 DYNLRB1Q9NP97 96 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 PEF1Q9UBV8 284 aaKnown RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 FOXD3Q9UJU5 478 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 J3QR06 171 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 PATE4P0C8F1 98 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 GNG10P50151 68 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 NUBP1P53384 320 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 PTCRAQ6ISU1 281 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CXorf67Q86X51 503 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CLDN16Q9Y5I7 305 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 KLF2Q9Y5W3 355 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 K7N7A8 449 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 STAG3L2P0CL84 134 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 DMWDQ09019 674 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 VMA21Q3ZAQ7 101 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 FAM166AQ6J272 317 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 NUP210LQ5VU65 1888 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CLDN14O95500 239 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 FCER1GP30273 86 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 ZXDAP98168 799 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 MESP2Q0VG99 397 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 SP7Q8TDD2 431 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 RCC1LQ96I51 464 aaKnown RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 PHF7Q9BWX1 381 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 J3QT63 122 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CXCL1P09341 107 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 FABP2P12104 132 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 MFAP2P55001 183 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CASP6P55212 293 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 PRSS12P56730 875 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 C1QL2Q7Z5L3 287 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 BLNKQ8WV28 456 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 SSMEM1Q8WWF3 244 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 OR2J1Q9GZK6 312 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CRISPLD2Q9H0B8 497 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 TBL2Q9Y4P3 447 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 275.6 ms