RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 HIST1H2BDP58876 126 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 PPP1CAP62136 330 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 HIST1H2BCP62807 126 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 HIST2H2BEQ16778 126 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.29■□□□□ 0.04
SYDE2-202ENST00000341460 VN1R4Q7Z5H5 301 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 HIST1H2BHQ93079 126 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 HIST1H2BNQ99877 126 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 HIST1H2BMQ99879 126 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 APOMO95445 188 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 MMDQ15546 238 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 RBPMS2Q6ZRY4 209 aaKnown RBP15.29■□□□□ 0.04
SYDE2-202ENST00000341460 TMEM170AQ8WVE7 144 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 SOSTQ9BQB4 213 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 LINC00470Q9BZP3 86 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 IL36RNQ9UBH0 155 aa15.29■□□□□ 0.04
SYDE2-202ENST00000341460 TNXAQ16473 311 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 OR13C6PQ8NH95 151 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 SPSB4Q96A44 273 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 TCF24Q7RTU0 167 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 SRP19P09132 144 aaKnown RBP15.28■□□□□ 0.04
SYDE2-202ENST00000341460 CTGFP29279 349 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 ZIC1Q15915 447 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 C2orf68Q2NKX9 166 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 TIMM23BQ5SRD1 257 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 HIST1H2BLQ99880 126 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 RAXQ9Y2V3 346 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 ECM29Q5VYK3 1845 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 TRIP6Q15654 476 aaKnown RBP15.28■□□□□ 0.04
SYDE2-202ENST00000341460 SLC23A3Q6PIS1 610 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 PGLYRP3Q96LB9 341 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 TMEM222Q9H0R3 208 aa15.28■□□□□ 0.04
SYDE2-202ENST00000341460 MRPS16Q9Y3D3 137 aaKnown RBP15.28■□□□□ 0.04
SYDE2-202ENST00000341460 MRPS18BQ9Y676 258 aaKnown RBP15.28■□□□□ 0.04
SYDE2-202ENST00000341460 hADV38S2A0JD32 116 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 ERGP11308 486 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 MRPS11P82912 194 aaKnown RBP15.27■□□□□ 0.04
SYDE2-202ENST00000341460 HIST1H1AQ02539 215 aaPredicted RBP15.27■□□□□ 0.04
SYDE2-202ENST00000341460 CIRBPQ14011 172 aaKnown RBP15.27■□□□□ 0.04
SYDE2-202ENST00000341460 NEU1Q99519 415 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 NRN1Q9NPD7 142 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 PRSS8Q16651 343 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 TMEM177Q53S58 311 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 C1orf53Q5VUE5 145 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 CYP2G1PQ6ZSU1 146 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 SLC25A38Q96DW6 304 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 RASL11BQ9BPW5 248 aa15.27■□□□□ 0.04
SYDE2-202ENST00000341460 ZNF735P0CB33 412 aa15.27■□□□□ 0.03
SYDE2-202ENST00000341460 OR4C13Q8NGP0 309 aa15.27■□□□□ 0.03
SYDE2-202ENST00000341460 FZR1Q9UM11 496 aa15.27■□□□□ 0.03
SYDE2-202ENST00000341460 TRAV9-2A0A087WT02 112 aa15.27■□□□□ 0.03
SYDE2-202ENST00000341460 TNFSF14O43557 240 aa15.27■□□□□ 0.03
SYDE2-202ENST00000341460 ZNF324BQ6AW86 544 aaPredicted RBP15.27■□□□□ 0.03
SYDE2-202ENST00000341460 TCFL5Q9UL49 500 aa15.27■□□□□ 0.03
SYDE2-202ENST00000341460 KLF4O43474 513 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 CELA2BP08218 269 aaPredicted RBP15.26■□□□□ 0.03
SYDE2-202ENST00000341460 FTH1P19P0C7X4 201 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 PNLIPP16233 465 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 GCSAMLQ5JQS6 135 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 ASCL4Q6XD76 172 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 SMIM8Q96KF7 97 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 PCOLCE2Q9UKZ9 415 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 OR51B2Q9Y5P1 312 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 TNFSF13O75888 250 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 FCGR3AP08637 254 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 TNFAIP6P98066 277 aaPredicted RBP15.26■□□□□ 0.03
SYDE2-202ENST00000341460 SRSF4Q08170 494 aaKnown RBP15.26■□□□□ 0.03
SYDE2-202ENST00000341460 R4GN57 208 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 H0Y980 276 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 ATXN7O15265 892 aaPredicted RBP15.26■□□□□ 0.03
SYDE2-202ENST00000341460 HOXB3P14651 431 aaPredicted RBP15.26■□□□□ 0.03
SYDE2-202ENST00000341460 UBE2V1Q13404 147 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 OR4X2Q8NGF9 303 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 GTSF1LQ9H1H1 148 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 LHX9Q9NQ69 397 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 A0A1W2PPC1 479 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 RPL36A-HNRNPH2H7BZ11 118 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 PPIHO43447 177 aaKnown RBP15.26■□□□□ 0.03
SYDE2-202ENST00000341460 CT62P0C5K7 136 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 HTN1P15515 57 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 HBBP68871 147 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 LRRC75BQ2VPJ9 315 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 HIST3H2BBQ8N257 126 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 LRRC29Q8WV35 223 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 TM4SF19Q96DZ7 209 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 IMMP2LQ96T52 175 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 IL36BQ9NZH7 164 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 DSPPQ9NZW4 1301 aa15.26■□□□□ 0.03
SYDE2-202ENST00000341460 TMEM50AO95807 157 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 RNASE1P07998 156 aaKnown RBP15.25■□□□□ 0.03
SYDE2-202ENST00000341460 CXorf66Q5JRM2 361 aaPredicted RBP15.25■□□□□ 0.03
SYDE2-202ENST00000341460 TCF23Q7RTU1 214 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 PLSCR2Q9NRY7 297 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 TRAV38-1A0A0B4J264 116 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 FAM90A27PA6NNH2 459 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 SERF1AO75920 110 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 STARD6P59095 220 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 POC1AQ8NBT0 407 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 FAM222BQ8WU58 562 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms