RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 BARX1Q9HBU1 254 aaPredicted RBP12.72□□□□□ -0.37
RRP1B-201ENST00000340648 PLXNA3P51805 1871 aa12.72□□□□□ -0.37
RRP1B-201ENST00000340648 EPOPA6NHQ4 379 aa12.72□□□□□ -0.37
RRP1B-201ENST00000340648 NPIPB7O75200 414 aa12.72□□□□□ -0.37
RRP1B-201ENST00000340648 NHLH1Q02575 133 aa12.72□□□□□ -0.37
RRP1B-201ENST00000340648 MIC13Q5XKP0 118 aa12.72□□□□□ -0.37
RRP1B-201ENST00000340648 OR10S1Q8NGN2 331 aa12.72□□□□□ -0.37
RRP1B-201ENST00000340648 RBP4P02753 201 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 SNRPCP09234 159 aaKnown RBP12.71□□□□□ -0.37
RRP1B-201ENST00000340648 COL10A1Q03692 680 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 FAM166AQ6J272 317 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 CALHM1Q8IU99 346 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 PTPRDP23468 1912 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 LDLRAD4O15165 306 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 GZMHP20718 246 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 OR2D3Q8NGH3 330 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 PRSS3P2Q8NHM4 247 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 ATG101Q9BSB4 218 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 MRPL18Q9H0U6 180 aaKnown RBP12.71□□□□□ -0.37
RRP1B-201ENST00000340648 GNB4Q9HAV0 340 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 PPP1R14DQ9NXH3 145 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 A0A087WWC5 75 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 C11orf42Q8N5U0 333 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 FAM216AQ8WUB2 273 aa12.71□□□□□ -0.37
RRP1B-201ENST00000340648 TRBV6-7A0A0A0MS04 114 aa12.71□□□□□ -0.38
RRP1B-201ENST00000340648 ICAM4Q14773 271 aa12.71□□□□□ -0.38
RRP1B-201ENST00000340648 DEFB109BQ30KR1 87 aa12.71□□□□□ -0.38
RRP1B-201ENST00000340648 HES3Q5TGS1 186 aa12.71□□□□□ -0.38
RRP1B-201ENST00000340648 ZNF645Q8N7E2 425 aa12.71□□□□□ -0.38
RRP1B-201ENST00000340648 OR1L4Q8NGR5 311 aa12.71□□□□□ -0.38
RRP1B-201ENST00000340648 ZNF837Q96EG3 531 aaPredicted RBP12.71□□□□□ -0.38
RRP1B-201ENST00000340648 GSX1Q9H4S2 264 aaPredicted RBP12.71□□□□□ -0.38
RRP1B-201ENST00000340648 OR5AL1P0C617 328 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 PDPNQ86YL7 162 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 OR1B1Q8NGR6 318 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 MRPL13Q9BYD1 178 aaKnown RBP12.7□□□□□ -0.38
RRP1B-201ENST00000340648 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
RRP1B-201ENST00000340648 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 DHRS13Q6UX07 377 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 MOB3BQ86TA1 216 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 PSMG3Q9BT73 122 aaPredicted RBP12.7□□□□□ -0.38
RRP1B-201ENST00000340648 AHCTF1Q8WYP5 2266 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 BMPR1BO00238 502 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BJP06899 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 FOLR2P14207 255 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BOP23527 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BBP33778 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BDP58876 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BCP62807 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 FHL1Q13642 323 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST2H2BEQ16778 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.7□□□□□ -0.38
RRP1B-201ENST00000340648 ZNF826PQ6ZT77 177 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BHQ93079 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 LSM10Q969L4 123 aaKnown RBP12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BNQ99877 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H2BMQ99879 126 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 S1PR2O95136 353 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 LGALS4P56470 323 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 MOGAT3Q86VF5 341 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 C18orf12Q96KH6 178 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 NPVFQ9HCQ7 196 aa12.7□□□□□ -0.38
RRP1B-201ENST00000340648 SIAH2O43255 324 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 UCP1P25874 307 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 WNT5AP41221 380 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 TAS2R60P59551 318 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 SPATA45Q537H7 98 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 WDFY1Q8IWB7 410 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 ADTRPQ96IZ2 230 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 IL19Q9UHD0 177 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 LOC102724200A0A096LPH7 203 aaPredicted RBP12.69□□□□□ -0.38
RRP1B-201ENST00000340648 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 MFAP2P55001 183 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 RNF144BQ7Z419 303 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 TMEM191AQ9H0A3 160 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 YTHDF2Q9Y5A9 579 aaKnown RBP12.69□□□□□ -0.38
RRP1B-201ENST00000340648 HS3ST3B1Q9Y662 390 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 K7N7A8 449 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 CD99P14209 185 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 KLF3P57682 345 aaPredicted RBP12.69□□□□□ -0.38
RRP1B-201ENST00000340648 HEPN1Q6WQI6 88 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 FAM89BQ8N5H3 189 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 FAM90A26D6RGX4 464 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 TNFAIP6P98066 277 aaPredicted RBP12.69□□□□□ -0.38
RRP1B-201ENST00000340648 PRDM14Q9GZV8 571 aa12.69□□□□□ -0.38
RRP1B-201ENST00000340648 hCG_38984A0A1B0GV85 526 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 HPRT1P00492 218 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 HINT1P49773 126 aaPredicted RBP12.68□□□□□ -0.38
RRP1B-201ENST00000340648 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 KIAA1644Q3SXP7 199 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 DRAM1Q8N682 238 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 NDUFB3O43676 98 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 SDF2L1Q9HCN8 221 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 RTTNQ86VV8 2226 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 TMEM210A6NLX4 147 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms