RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CCL11P51671 97 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 TFF3Q07654 80 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 OR10G4Q8NGN3 311 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 OR10G9Q8NGN4 311 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 OR10G7Q8NGN6 311 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 NINJ1Q92982 152 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 WDR61Q9GZS3 305 aaKnown RBP12.17□□□□□ -0.46
CPSF7-201ENST00000340437 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A10PA6NDY2 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A18PA6NE21 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A16PA6NEW6 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A20PA6NIJ5 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A8PA6NJQ4 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A7PA6NKC0 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A22PA8MWA6 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A12PA8MX19 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A5PA8MXJ8 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A23PA8MXZ1 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 PTBP3O95758 552 aaKnown RBP12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A15PP0C7V4 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A13PP0C7W8 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A14PP0C7W9 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FAM90A24PP0C7X0 464 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 RAC2P15153 192 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 GALR1P47211 349 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 PSMB3P49720 205 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 COL10A1Q03692 680 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 P2RY6Q15077 328 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 BSXQ3C1V8 233 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 TMEM41BQ5BJD5 291 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 VHLLQ6RSH7 139 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 OR4X1Q8NH49 305 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF703Q9H7S9 590 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-201ENST00000340437 LIN7CQ9NUP9 197 aaKnown RBP12.16□□□□□ -0.46
CPSF7-201ENST00000340437 A0A087X0M5 115 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 A0A1B0GX30 115 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 DUXBA0A1W2PPF3 345 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 IFNL4K9M1U5 179 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 PRSS8Q16651 343 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 LRRC75BQ2VPJ9 315 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 ACSM6Q6P461 480 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 ZNF600Q6ZNG1 722 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 OR10A7Q8NGE5 316 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 OR13D1Q8NGV5 346 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 CDH20Q9HBT6 801 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FOXJ2Q9P0K8 574 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 FUT9Q9Y231 359 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 PPP5D1E7EU14 171 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 MRGPRGQ86SM5 289 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 WDYHV1Q96HA8 205 aa12.16□□□□□ -0.46
CPSF7-201ENST00000340437 PGPEP1LA6NFU8 196 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 AGFG2O95081 481 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 S1PR2O95136 353 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 EDDM3BP56851 147 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 RPL30P62888 115 aaKnown RBP12.15□□□□□ -0.46
CPSF7-201ENST00000340437 OR8G1Q15617 311 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 GCSAMLQ5JQS6 135 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 DCTN5Q9BTE1 182 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 MUC6Q6W4X9 2439 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 TSTD3H0UI37 97 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 CER1O95813 267 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 CEACAM1P13688 526 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-201ENST00000340437 TGFBR3Q03167 851 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 HIST1H2BLQ99880 126 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 RTL8AQ9BWD3 113 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 GPR87Q9BY21 358 aa12.15□□□□□ -0.46
CPSF7-201ENST00000340437 LRP5LA4QPB2 252 aa12.15□□□□□ -0.47
CPSF7-201ENST00000340437 FABP6P51161 128 aa12.15□□□□□ -0.47
CPSF7-201ENST00000340437 OR8G5Q8NG78 346 aa12.15□□□□□ -0.47
CPSF7-201ENST00000340437 IL17BQ9UHF5 180 aa12.15□□□□□ -0.47
CPSF7-201ENST00000340437 C1QTNF9BB2RNN3 333 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 SH2D1BO14796 132 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 IGLV2-14P01704 120 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 MEOX1P50221 254 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 CD81P60033 236 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 UBE2NP61088 152 aaKnown RBP12.14□□□□□ -0.47
CPSF7-201ENST00000340437 WDR86Q86TI4 376 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 STRADBQ9C0K7 418 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 PARLQ9H300 379 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 ABI3Q9P2A4 366 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 NCOR2Q9Y618 2525 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 C17orf98A8MV24 154 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 J3QT63 122 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 IGHEP01854 428 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 TRA2AQ13595 282 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF7-201ENST00000340437 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 OR51I2Q9H344 312 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 PATZ1Q9HBE1 687 aaKnown RBP12.14□□□□□ -0.47
CPSF7-201ENST00000340437 MPC1Q9Y5U8 109 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 KIAA1549Q9HCM3 1950 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 TRAV38-1A0A0B4J264 116 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 OR5B21A6NL26 309 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 PSPNO60542 156 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 OPN1MWP04001 364 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms