RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CCL3L1P16619 93 aa10.83□□□□□ -0.67
LIN54-201ENST00000340417 C16orf82Q7Z2V1 217 aa10.83□□□□□ -0.67
LIN54-201ENST00000340417 SLX1AQ9BQ83 275 aa10.83□□□□□ -0.67
LIN54-201ENST00000340417 LPAR5Q9H1C0 372 aa10.83□□□□□ -0.67
LIN54-201ENST00000340417 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.67
LIN54-201ENST00000340417 LY6HO94772 140 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 NDUFB6O95139 128 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 GABRB1P18505 474 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 VSIG4Q9Y279 399 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 WNT5AP41221 380 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 COMMD7Q86VX2 200 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 RHOVQ96L33 236 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 SRRQ9GZT4 340 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 SLC45A2Q9UMX9 530 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 A0A0A6YYJ9 748 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 PPP1R1CQ8WVI7 109 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 SSMEM1Q8WWF3 244 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 A0A0G2JLM5 398 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 KBTBD11-OT1A0A1B0GTJ5 212 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 UBE2KP61086 200 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 CTF1Q16619 201 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 SLC51BQ86UW2 128 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 KCNRGQ8N5I3 272 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 SMCO4Q9NRQ5 59 aa10.83□□□□□ -0.68
LIN54-201ENST00000340417 POM121CA8CG34 1229 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 CORTO00230 105 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 OR2A4O95047 310 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 MFAP4P55083 255 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 PXDC1Q5TGL8 231 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 WDR82Q6UXN9 313 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 TMEM91Q6ZNR0 172 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 LINC00299Q6ZSB3 139 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 OR4D10Q8NGI6 311 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 OR2A7Q96R45 310 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 BIN3Q9NQY0 253 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 OR52M1Q8NGK5 317 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 OR4X1Q8NH49 305 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 RNF2Q99496 336 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 NBASA2RRP1 2371 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 SMLR1H3BR10 107 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 ATP6V1FQ16864 119 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 ZNF767PQ75MW2 155 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 OVCH2Q7RTZ1 564 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 CHRDL1Q9BU40 450 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 KLF2Q9Y5W3 355 aaPredicted RBP10.82□□□□□ -0.68
LIN54-201ENST00000340417 IGHV3OR16-12A0A075B7B8 117 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 LRRC75BQ2VPJ9 315 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 TMUB2Q71RG4 321 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 MOSP00540 346 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 ADIRFQ15847 76 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 BAK1Q16611 211 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 STXBP6Q8NFX7 210 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 CDC42EP3Q9UKI2 254 aa10.82□□□□□ -0.68
LIN54-201ENST00000340417 CEACAM4O75871 244 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 Q96M66 194 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 ANKRD20A5PA0PJZ0 165 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 ZNF14P17017 642 aaPredicted RBP10.81□□□□□ -0.68
LIN54-201ENST00000340417 RAB4AP20338 218 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 DHRS2Q13268 280 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 BEX4Q9NWD9 120 aaPredicted RBP10.81□□□□□ -0.68
LIN54-201ENST00000340417 POLR2GP62487 172 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIN54-201ENST00000340417 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 FAM24AA6NFZ4 105 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 GAMTQ14353 236 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 FDX2Q6P4F2 183 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 VMO1Q7Z5L0 202 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 OR51I2Q9H344 312 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 DKK4Q9UBT3 224 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 F5H697 171 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 TMEM178BH3BS89 294 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 ADIPOQQ15848 244 aa10.81□□□□□ -0.68
LIN54-201ENST00000340417 BMPR1BO00238 502 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 PGA5P0DJD9 388 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 LFNGQ8NES3 379 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 PFDN5Q99471 154 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 SLC25A32Q9H2D1 315 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 FBXL15Q9H469 300 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 HSF4Q9ULV5 492 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 ABCA4P78363 2273 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 CD99P14209 185 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 COL8A2P25067 703 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 RELQ04864 619 aaPredicted RBP10.8□□□□□ -0.68
LIN54-201ENST00000340417 KLF9Q13886 244 aaPredicted RBP10.8□□□□□ -0.68
LIN54-201ENST00000340417 IRF3Q14653 427 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 TM4SF20Q53R12 229 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 OR5C1Q8NGR4 320 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 MITD1Q8WV92 249 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 PRR13Q9NZ81 148 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 RRN3P1Q2M238 152 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 SLC24A4Q8NFF2 622 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 C16orf92Q96LL3 132 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 TMEM133Q9H2Q1 129 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
LIN54-201ENST00000340417 ACAA1P09110 424 aaPredicted RBP10.8□□□□□ -0.68
LIN54-201ENST00000340417 C1orf100Q5SVJ3 147 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 TCTEX1D1Q8N7M0 179 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 NTNG2Q96CW9 530 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 ITPKCQ96DU7 683 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 TRBV5-7A0A0A0MS05 114 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms