RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ACSF3Q4G176 576 aaPredicted RBP12.51□□□□□ -0.41
RET-201ENST00000340058 RAB1CQ92928 201 aa12.51□□□□□ -0.41
RET-201ENST00000340058 FAM103A1Q9BTL3 118 aaKnown RBP12.51□□□□□ -0.41
RET-201ENST00000340058 CDX4O14627 284 aaPredicted RBP12.51□□□□□ -0.41
RET-201ENST00000340058 SMPD2O60906 423 aa12.51□□□□□ -0.41
RET-201ENST00000340058 MMP9P14780 707 aa12.51□□□□□ -0.41
RET-201ENST00000340058 ZNF66Q6ZN08 573 aa12.51□□□□□ -0.41
RET-201ENST00000340058 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
RET-201ENST00000340058 PCGF1Q9BSM1 259 aa12.51□□□□□ -0.41
RET-201ENST00000340058 ZNF331Q9NQX6 463 aaPredicted RBP12.51□□□□□ -0.41
RET-201ENST00000340058 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
RET-201ENST00000340058 LOC390937A0A1W2PQ73 354 aa12.51□□□□□ -0.41
RET-201ENST00000340058 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
RET-201ENST00000340058 THBS3P49746 956 aa12.51□□□□□ -0.41
RET-201ENST00000340058 H3F3AP84243 136 aa12.51□□□□□ -0.41
RET-201ENST00000340058 DBX2Q6ZNG2 339 aa12.51□□□□□ -0.41
RET-201ENST00000340058 MARS2Q96GW9 593 aaKnown RBP12.51□□□□□ -0.41
RET-201ENST00000340058 OR4C12Q96R67 309 aa12.51□□□□□ -0.41
RET-201ENST00000340058 A0A0C4DFX4 3053 aa12.5□□□□□ -0.41
RET-201ENST00000340058 IGKV3-7A0A075B6H7 116 aa12.5□□□□□ -0.41
RET-201ENST00000340058 LY6G6EA0A0G2JKS1 128 aa12.5□□□□□ -0.41
RET-201ENST00000340058 E9PLN8 166 aa12.5□□□□□ -0.41
RET-201ENST00000340058 J3QR06 171 aa12.5□□□□□ -0.41
RET-201ENST00000340058 FGF2P09038 288 aa12.5□□□□□ -0.41
RET-201ENST00000340058 FBP1P09467 338 aa12.5□□□□□ -0.41
RET-201ENST00000340058 NPY1RP25929 384 aa12.5□□□□□ -0.41
RET-201ENST00000340058 TMEM187Q14656 261 aa12.5□□□□□ -0.41
RET-201ENST00000340058 TMEM241Q24JQ0 296 aa12.5□□□□□ -0.41
RET-201ENST00000340058 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
RET-201ENST00000340058 SELENOHQ8IZQ5 122 aaKnown RBP12.5□□□□□ -0.41
RET-201ENST00000340058 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
RET-201ENST00000340058 OR5B3Q8NH48 314 aa12.5□□□□□ -0.41
RET-201ENST00000340058 U3KQA8 63 aa12.5□□□□□ -0.41
RET-201ENST00000340058 G3V3Q6 166 aa12.5□□□□□ -0.41
RET-201ENST00000340058 ZG16O60844 167 aa12.5□□□□□ -0.41
RET-201ENST00000340058 FABP4P15090 132 aa12.5□□□□□ -0.41
RET-201ENST00000340058 HLA-GP17693 338 aa12.5□□□□□ -0.41
RET-201ENST00000340058 ABLIM2Q6H8Q1 611 aa12.5□□□□□ -0.41
RET-201ENST00000340058 NABP1Q96AH0 204 aa12.5□□□□□ -0.41
RET-201ENST00000340058 NRIP2Q9BQI9 281 aa12.5□□□□□ -0.41
RET-201ENST00000340058 C1QTNF5Q9BXJ0 243 aa12.5□□□□□ -0.41
RET-201ENST00000340058 LINC00470Q9BZP3 86 aa12.5□□□□□ -0.41
RET-201ENST00000340058 SLC2A8Q9NY64 477 aa12.5□□□□□ -0.41
RET-201ENST00000340058 TRAV14DV4A0A0A6YYC5 116 aa12.5□□□□□ -0.41
RET-201ENST00000340058 ARPC4-TTLL3A0A0A6YYG9 625 aa12.5□□□□□ -0.41
RET-201ENST00000340058 C12orf77C9JDV5 145 aa12.5□□□□□ -0.41
RET-201ENST00000340058 ADH4P08319 380 aa12.5□□□□□ -0.41
RET-201ENST00000340058 RPL39P5Q59GN2 51 aa12.5□□□□□ -0.41
RET-201ENST00000340058 NHLRC3Q5JS37 347 aa12.5□□□□□ -0.41
RET-201ENST00000340058 FAM209AQ5JX71 171 aa12.5□□□□□ -0.41
RET-201ENST00000340058 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
RET-201ENST00000340058 FAM216BQ8N7L0 139 aa12.5□□□□□ -0.41
RET-201ENST00000340058 RAB1BQ9H0U4 201 aa12.5□□□□□ -0.41
RET-201ENST00000340058 ZDHHC11Q9H8X9 412 aa12.5□□□□□ -0.41
RET-201ENST00000340058 WNK1Q9H4A3 2382 aa12.49□□□□□ -0.41
RET-201ENST00000340058 LILRA1O75019 489 aa12.49□□□□□ -0.41
RET-201ENST00000340058 NCMAPQ5T1S8 102 aa12.49□□□□□ -0.41
RET-201ENST00000340058 ABHD12Q8N2K0 398 aa12.49□□□□□ -0.41
RET-201ENST00000340058 ZNF561Q8N587 486 aa12.49□□□□□ -0.41
RET-201ENST00000340058 POC1AQ8NBT0 407 aa12.49□□□□□ -0.41
RET-201ENST00000340058 FLYWCH2Q96CP2 140 aaKnown RBP12.49□□□□□ -0.41
RET-201ENST00000340058 FRMPD3Q5JV73 1810 aa12.49□□□□□ -0.41
RET-201ENST00000340058 B2MP61769 119 aa12.49□□□□□ -0.41
RET-201ENST00000340058 PSG5Q15238 335 aa12.49□□□□□ -0.41
RET-201ENST00000340058 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
RET-201ENST00000340058 WDFY1Q8IWB7 410 aa12.49□□□□□ -0.41
RET-201ENST00000340058 TCEAL7Q9BRU2 100 aa12.49□□□□□ -0.41
RET-201ENST00000340058 PKIBQ9C010 78 aa12.49□□□□□ -0.41
RET-201ENST00000340058 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
RET-201ENST00000340058 ATPIF1Q9UII2 106 aa12.49□□□□□ -0.41
RET-201ENST00000340058 IGKV1-27A0A075B6S5 117 aa12.49□□□□□ -0.41
RET-201ENST00000340058 H0Y980 276 aa12.49□□□□□ -0.41
RET-201ENST00000340058 LYZP61626 148 aa12.49□□□□□ -0.41
RET-201ENST00000340058 SEC11BP0C7V7 166 aa12.48□□□□□ -0.41
RET-201ENST00000340058 COX5BP10606 129 aa12.48□□□□□ -0.41
RET-201ENST00000340058 Q56UQ5 140 aa12.48□□□□□ -0.41
RET-201ENST00000340058 COMMD1Q8N668 190 aa12.48□□□□□ -0.41
RET-201ENST00000340058 TMEM45BQ96B21 275 aa12.48□□□□□ -0.41
RET-201ENST00000340058 SIRT7Q9NRC8 400 aa12.48□□□□□ -0.41
RET-201ENST00000340058 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
RET-201ENST00000340058 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
RET-201ENST00000340058 PCDH15Q96QU1 1955 aa12.48□□□□□ -0.41
RET-201ENST00000340058 LAMA3Q16787 3333 aa12.48□□□□□ -0.41
RET-201ENST00000340058 H3BQ15 152 aa12.48□□□□□ -0.41
RET-201ENST00000340058 CLDN34H7C241 214 aa12.48□□□□□ -0.41
RET-201ENST00000340058 HSPB1P04792 205 aaKnown RBP12.48□□□□□ -0.41
RET-201ENST00000340058 WNT5AP41221 380 aa12.48□□□□□ -0.41
RET-201ENST00000340058 KRTCAP3Q53RY4 240 aa12.48□□□□□ -0.41
RET-201ENST00000340058 RARRES2Q99969 163 aa12.48□□□□□ -0.41
RET-201ENST00000340058 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
RET-201ENST00000340058 GBF1Q92538 1859 aa12.48□□□□□ -0.41
RET-201ENST00000340058 RNF222A6NCQ9 220 aa12.48□□□□□ -0.41
RET-201ENST00000340058 C11orf94C9JXX5 98 aa12.48□□□□□ -0.41
RET-201ENST00000340058 H0YIZ8 118 aa12.48□□□□□ -0.41
RET-201ENST00000340058 ZNF735P0CB33 412 aa12.48□□□□□ -0.41
RET-201ENST00000340058 EGR1P18146 543 aa12.48□□□□□ -0.41
RET-201ENST00000340058 BPIFB3P59826 476 aa12.48□□□□□ -0.41
RET-201ENST00000340058 DLK1P80370 383 aa12.48□□□□□ -0.41
RET-201ENST00000340058 MMDQ15546 238 aa12.48□□□□□ -0.41
RET-201ENST00000340058 RNFT1Q5M7Z0 435 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms