RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 IGKV3-15P01624 115 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 CECR9P0C854 216 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 GABRA2P47869 451 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 RPL30P62888 115 aaKnown RBP13.66□□□□□ -0.22
LITAF-201ENST00000339430 BTNL3Q6UXE8 466 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 LILRB2Q8N423 598 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 C12orf57Q99622 126 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 PLSCR4Q9NRQ2 329 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 SH3BGRL2Q9UJC5 107 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 IGHV3-43A0A0B4J1X8 118 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 PIGBOS1A0A0B4J2F0 54 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.66□□□□□ -0.22
LITAF-201ENST00000339430 ZNF727A8MUV8 499 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 H3BQ15 152 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 PTBP3O95758 552 aaKnown RBP13.66□□□□□ -0.22
LITAF-201ENST00000339430 KRASP01116 189 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 HBZP02008 142 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 IGHV3-43DP0DP04 118 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 G6PCP35575 357 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 SP5Q6BEB4 398 aaPredicted RBP13.66□□□□□ -0.22
LITAF-201ENST00000339430 ADAM5Q6NVV9 412 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 ZNF525Q8N782 197 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 CLDND2Q8NHS1 167 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 COQ2Q96H96 371 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 OPN3Q9H1Y3 402 aaPredicted RBP13.66□□□□□ -0.22
LITAF-201ENST00000339430 RPRMQ9NS64 109 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 PROCRQ9UNN8 238 aa13.66□□□□□ -0.22
LITAF-201ENST00000339430 RAB5AP20339 215 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 TIMP3P35625 211 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 FGF8P55075 233 aaPredicted RBP13.65□□□□□ -0.22
LITAF-201ENST00000339430 RPS23P62266 143 aaKnown RBP13.65□□□□□ -0.22
LITAF-201ENST00000339430 WDR82Q6UXN9 313 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 ZNF645Q8N7E2 425 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 ZNF610Q8N9Z0 462 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 SMDT1Q9H4I9 107 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 TUBA4BQ9H853 241 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 COA4Q9NYJ1 87 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 GNG13Q9P2W3 67 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 OR2C1O95371 312 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 CGAP01215 116 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 COX5AP20674 150 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 SSTR5P35346 364 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 LINC00205P59089 165 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 OR2B8PP59922 312 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 OR8G2PQ6IF36 304 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 LCN15Q6UWW0 184 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 ACP7Q6ZNF0 438 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 RFESDQ8TAC1 157 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 RAB39BQ96DA2 213 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 CXXC4Q9H2H0 198 aa13.65□□□□□ -0.22
LITAF-201ENST00000339430 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 CD200P41217 278 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 GLIPR1P48060 266 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 RAB2AP61019 212 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 UBE2KP61086 200 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 RNF212Q495C1 297 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 SSX7Q7RTT5 188 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 ZNF429Q86V71 674 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 ZNF835Q9Y2P0 537 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 OOEPA6NGQ2 149 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 RNF212BA8MTL3 300 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 DEFB108AA8MXU0 73 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 CLDN1O95832 211 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 HBE1P02100 147 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 S100A6P06703 90 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 COL10A1Q03692 680 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 LTC4SQ16873 150 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 NINJ1Q92982 152 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 RBMXL1Q96E39 390 aaKnown RBP13.64□□□□□ -0.23
LITAF-201ENST00000339430 RBKSQ9H477 322 aa13.64□□□□□ -0.23
LITAF-201ENST00000339430 UBE2L5PA0A1B0GUS4 154 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 S1PR2O95136 353 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 CEACAM8P31997 349 aaPredicted RBP13.63□□□□□ -0.23
LITAF-201ENST00000339430 ELLP55199 621 aaPredicted RBP13.63□□□□□ -0.23
LITAF-201ENST00000339430 RPS16P62249 146 aaKnown RBP13.63□□□□□ -0.23
LITAF-201ENST00000339430 HBG1P69891 147 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 HBG2P69892 147 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 ZNF726P1Q15940 193 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 EIF2S3LQ2VIR3 472 aaKnown RBP13.63□□□□□ -0.23
LITAF-201ENST00000339430 SLC35E4Q6ICL7 350 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 ZNF561Q8N587 486 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 OR4C12Q96R67 309 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 DCTN5Q9BTE1 182 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 ZNF665Q9H7R5 613 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 MMP24Q9Y5R2 645 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 OR5H1A6NKK0 313 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 C17orf98A8MV24 154 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 SFTPCP11686 197 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 AGAP20933 346 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 TAGLN2P37802 199 aaKnown RBP13.63□□□□□ -0.23
LITAF-201ENST00000339430 RBPJQ06330 500 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 DPPA3Q6W0C5 159 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 OR13A1Q8NGR1 328 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 TCTEX1D2Q8WW35 142 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 PLPPR2Q96GM1 343 aa13.63□□□□□ -0.23
LITAF-201ENST00000339430 HSPB1P04792 205 aaKnown RBP13.62□□□□□ -0.23
LITAF-201ENST00000339430 GCH1P30793 250 aa13.62□□□□□ -0.23
LITAF-201ENST00000339430 TNFRSF9Q07011 255 aa13.62□□□□□ -0.23
LITAF-201ENST00000339430 EDDM3AQ14507 147 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms