RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
RTN3-201ENST00000338850 A0A096LPE4 126 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 A0A0G2JRQ6 117 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 A0A1B0GWJ7 208 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 A0A1W2PPZ6 126 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 SLC33A1O00400 549 aaPredicted RBP9.06□□□□□ -0.96
RTN3-201ENST00000338850 SMPD2O60906 423 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 IGHG3P01860 377 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 CELA3AP09093 270 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 IGFBP2P18065 325 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 EPHA1P21709 976 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 CHRNB4P30926 498 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 GLIPR1P48060 266 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 TGFBR3Q03167 851 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 EIF4EBP1Q13541 118 aaPredicted RBP9.06□□□□□ -0.96
RTN3-201ENST00000338850 SLC10A1Q14973 349 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 PDCD1Q15116 288 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 TMEM249Q2WGJ8 235 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 SLC35E4Q6ICL7 350 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 TRAT1Q6PIZ9 186 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 TMEM14EPQ6UXP3 125 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 ETV3LQ6ZN32 361 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 C20orf204Q6ZNR8 217 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 SCGB1C1Q8TD33 95 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 C2CD4CQ8TF44 421 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 RAB39BQ96DA2 213 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 WDYHV1Q96HA8 205 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 HS3ST6Q96QI5 342 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 PARP12Q9H0J9 701 aaKnown RBP9.06□□□□□ -0.96
RTN3-201ENST00000338850 IL36RNQ9UBH0 155 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 LIPGQ9Y5X9 500 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 ZNF407Q9C0G0 2248 aa9.06□□□□□ -0.96
RTN3-201ENST00000338850 ANKRD17O75179 2603 aaKnown RBP9.06□□□□□ -0.96
RTN3-201ENST00000338850 HIVEP1P15822 2718 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 ARID1AO14497 2285 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
RTN3-201ENST00000338850 A0A1W2PPE2 198 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 TMEM30CPA0ZSE6 113 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 FAM90A9PA6NNJ1 464 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 SH2D1BO14796 132 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 CST7O76096 145 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 OR2H2O95918 312 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 IGKV1-39P01597 117 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 IGKV1-5P01602 117 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 MBP02144 154 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 IGKV1D-39P04432 117 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 GLI4P10075 376 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 PSG2P11465 335 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 HOXA5P20719 270 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 CCNOP22674 350 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 S100PP25815 95 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 FOXG1P55316 489 aaPredicted RBP9.05□□□□□ -0.96
RTN3-201ENST00000338850 UBE2KP61086 200 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 TFF3Q07654 80 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 ZNF154Q13106 437 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 CATR1Q13166 79 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 GUSBP1Q15486 140 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 AARDQ4LEZ3 155 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 ZNF585BQ52M93 769 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 TMEM41BQ5BJD5 291 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 KRBOX4Q5JUW0 171 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 ZNF429Q86V71 674 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 MDP1Q86V88 176 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 FAM24BQ8N5W8 94 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 ZNF645Q8N7E2 425 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 NAXEQ8NCW5 288 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 RND1Q92730 232 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 CIB3Q96Q77 187 aaPredicted RBP9.05□□□□□ -0.96
RTN3-201ENST00000338850 WDR61Q9GZS3 305 aaKnown RBP9.05□□□□□ -0.96
RTN3-201ENST00000338850 MAGT1Q9H0U3 335 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 OR51M1Q9H341 326 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 OBP2BQ9NPH6 170 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 HSPB7Q9UBY9 170 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 CACNG5Q9UF02 275 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 MED12LQ86YW9 2145 aa9.05□□□□□ -0.96
RTN3-201ENST00000338850 DNAJC13O75165 2243 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 TRBV24-1A0A075B6N3 115 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.04□□□□□ -0.96
RTN3-201ENST00000338850 FAM90A27PA6NNH2 459 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 TMEM250H0YL14 139 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 IFNL4K9M1U5 179 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 AQP7O14520 342 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 GPR37O15354 613 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 CYB5R3P00387 301 aaPredicted RBP9.04□□□□□ -0.96
RTN3-201ENST00000338850 PPP1CBP62140 327 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 CCL20P78556 96 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 SRYQ05066 204 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 FABP9Q0Z7S8 132 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 ELOBQ15370 118 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 VWC2Q2TAL6 325 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 FAM90A2PQ658T7 463 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 ZNF66Q6ZN08 573 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 ZFP82Q8N141 532 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 CYB561D1Q8N8Q1 229 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 SCCPDHQ8NBX0 429 aa9.04□□□□□ -0.96
RTN3-201ENST00000338850 OR51H1Q8NH63 302 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms