RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TMEM33P57088 247 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 RPL30P62888 115 aaKnown RBP13.43□□□□□ -0.26
HPS1-202ENST00000338546 RPL31P62899 125 aaKnown RBP13.43□□□□□ -0.26
HPS1-202ENST00000338546 VAMP2P63027 116 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 PDZD9Q8IXQ8 264 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 SPAG16Q8N0X2 631 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 FGFRL1Q8N441 504 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 OR2C3Q8N628 320 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 TCTEX1D2Q8WW35 142 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 RAB39BQ96DA2 213 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 ABHD14AQ9BUJ0 271 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 LYRM2Q9NU23 88 aaPredicted RBP13.43□□□□□ -0.26
HPS1-202ENST00000338546 RPUSD1Q9UJJ7 312 aaKnown RBP13.43□□□□□ -0.26
HPS1-202ENST00000338546 WRBO00258 174 aa13.42□□□□□ -0.26
HPS1-202ENST00000338546 DUTP33316 252 aaKnown RBP13.42□□□□□ -0.26
HPS1-202ENST00000338546 LTC4SQ16873 150 aa13.42□□□□□ -0.26
HPS1-202ENST00000338546 CXorf66Q5JRM2 361 aaPredicted RBP13.42□□□□□ -0.26
HPS1-202ENST00000338546 FAM53AQ6NSI3 398 aaPredicted RBP13.42□□□□□ -0.26
HPS1-202ENST00000338546 NEU4Q8WWR8 484 aaPredicted RBP13.42□□□□□ -0.26
HPS1-202ENST00000338546 ARID1AO14497 2285 aa13.42□□□□□ -0.26
HPS1-202ENST00000338546 PKDREJQ9NTG1 2253 aa13.42□□□□□ -0.26
HPS1-202ENST00000338546 TRBV23-1A0A0A0MS06 115 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 A0A0G2JRQ6 117 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 FAM90A9PA6NNJ1 464 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 KIAA1324LA8MWY0 1029 aaPredicted RBP13.41□□□□□ -0.26
HPS1-202ENST00000338546 LEUTXA8MZ59 168 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 TOR1AO14656 332 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 RAB29O14966 203 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 GPR37O15354 613 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 P0C879 139 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 DAOP14920 347 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 POLR2GP62487 172 aaKnown RBP eCLIP13.41□□□□□ -0.26
HPS1-202ENST00000338546 BAXQ07812 192 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 C11orf71Q6IPW1 123 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 HEPN1Q6WQI6 88 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 UBAC2Q8NBM4 344 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 ZNF439Q8NDP4 499 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 ADTRPQ96IZ2 230 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 FBXL17Q9UF56 701 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 HIVEP3Q5T1R4 2406 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 USF3Q68DE3 2245 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 BORCS7-ASMTA0A0B4J1R7 106 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 ZG16O60844 167 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 ZNF134P52741 427 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 BRWD1-AS2P59051 145 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 TAS2R30P59541 319 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 CT45A1Q5HYN5 189 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 DTX2Q86UW9 622 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 C8orf31Q8N9H6 132 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 CT45A3Q8NHU0 189 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 ZNF714Q96N38 554 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 CACNG5Q9UF02 275 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 CACFD1Q9UGQ2 172 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 PRELID3BQ9Y3B1 194 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 WSB1Q9Y6I7 421 aa13.41□□□□□ -0.26
HPS1-202ENST00000338546 LINC00473A8K010 186 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 C17orf98A8MV24 154 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 CHST1O43916 411 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 RAMP3O60896 148 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 PROP1O75360 226 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 GOSR1O95249 250 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 HPRT1P00492 218 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 OMGP23515 440 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 Q6ZRM9 215 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 ARV1Q9H2C2 271 aa13.4□□□□□ -0.26
HPS1-202ENST00000338546 ITPR1Q14643 2758 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 MEX3AA1L020 520 aaKnown RBP13.39□□□□□ -0.27
HPS1-202ENST00000338546 DVL1O14640 695 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 SSSCA1O60232 199 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 MED6O75586 246 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 UQCRFS1P47985 274 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 RPL23AP62750 156 aaKnown RBP13.39□□□□□ -0.27
HPS1-202ENST00000338546 EWSR1Q01844 656 aaKnown RBP eCLIP13.39□□□□□ -0.27
HPS1-202ENST00000338546 TMEM200BQ69YZ2 307 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 BTNL3Q6UXE8 466 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 SLC25A48Q6ZT89 311 aaKnown RBP13.39□□□□□ -0.27
HPS1-202ENST00000338546 RNF141Q8WVD5 230 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.39□□□□□ -0.27
HPS1-202ENST00000338546 C19orf12Q9NSK7 152 aa13.39□□□□□ -0.27
HPS1-202ENST00000338546 ANKRD34BA5PLL1 514 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 M0R1X1 148 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 FGF16O43320 207 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 SYNGR2O43760 224 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 LY86O95711 162 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 IGHV2-70P01814 119 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 DANCRP0C864 163 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 EPHA1P21709 976 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 COL8A2P25067 703 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 THBS3P49746 956 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 NCR3LG1Q68D85 454 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 RPL7L1Q6DKI1 246 aaKnown RBP13.38□□□□□ -0.27
HPS1-202ENST00000338546 LYPD2Q6UXB3 125 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 COMMD7Q86VX2 200 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 TMEM252Q8N6L7 170 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 MARVELD3Q96A59 401 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 SMIM8Q96KF7 97 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 CTSZQ9UBR2 303 aa13.38□□□□□ -0.27
HPS1-202ENST00000338546 PFDN2Q9UHV9 154 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms