RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 HAND1O96004 215 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 TOMM20LQ6UXN7 152 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 UNQ6494/PRO21346Q6UXR6 183 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 RBMXL3Q8N7X1 1067 aaKnown RBP5.54□□□□□ -1.52
HMG20A-201ENST00000336216 TMEM18Q96B42 140 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 COMMD5Q9GZQ3 224 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 MPC1Q9Y5U8 109 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 MAP1LC3B2A6NCE7 125 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 TRDCB7Z8K6 153 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 CRYABP02511 175 aaKnown RBP5.54□□□□□ -1.52
HMG20A-201ENST00000336216 FOLR2P14207 255 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 RPS2P15880 293 aaKnown RBP5.54□□□□□ -1.52
HMG20A-201ENST00000336216 HIST1H1BP16401 226 aaKnown RBP5.54□□□□□ -1.52
HMG20A-201ENST00000336216 ZNF17P17021 662 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 GALR1P47211 349 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 PSMB3P49720 205 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 LGALS4P56470 323 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 FAM3BP58499 235 aaPredicted RBP5.54□□□□□ -1.52
HMG20A-201ENST00000336216 RTP5Q14D33 572 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 ZNF441Q8N8Z8 693 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 OR10A7Q8NGE5 316 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 OR5A2Q8NGI9 324 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 PRR7Q8TB68 274 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 PCGF1Q9BSM1 259 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 MAP1LC3BQ9GZQ8 125 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 KIAA1456Q9P272 454 aa5.54□□□□□ -1.52
HMG20A-201ENST00000336216 CELSR3Q9NYQ7 3312 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 TRGV10A0A0A0MS01 117 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 MT-CO2P00403 227 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 SLC25A6P12236 298 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 EGR1P18146 543 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 DTYMKP23919 212 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 ZFP36L1Q07352 338 aaKnown RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 ELOBQ15370 118 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 BAGE3Q86Y29 109 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 BAGE2Q86Y30 109 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 C22orf15Q8WYQ4 148 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 LRFN3Q9BTN0 628 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 OR51I2Q9H344 312 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 USP9XQ93008 2570 aaPredicted RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 IGHV3-72A0A0B4J1Y9 119 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 PIGBOS1A0A0B4J2F0 54 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 NKX6-3A6NJ46 265 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 ZNF737O75373 536 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 SRP19P09132 144 aaKnown RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 FAM27E3Q08E93 113 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 Q0VFX4 171 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 TMEM187Q14656 261 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 CEACAM21Q3KPI0 293 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 BHLHA15Q7RTS1 189 aaPredicted RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 WDFY1Q8IWB7 410 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 SSMEM1Q8WWF3 244 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 TMEM204Q9BSN7 226 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 DCTN5Q9BTE1 182 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 ZNF703Q9H7S9 590 aaPredicted RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 TUBA4BQ9H853 241 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 LPAR2Q9HBW0 351 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 OR1A1Q9P1Q5 309 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 V9GYS6 101 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 FRYLO94915 3013 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 IGHV3-21A0A0B4J1V1 117 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 J3QT63 122 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 NEURL1O76050 574 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 IGHV3-48P01763 117 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 VDAC1P21796 283 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 RPP30P78346 268 aaKnown RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 RPL19P84098 196 aaKnown RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 SRSF4Q08170 494 aaKnown RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 BSXQ3C1V8 233 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 C10orf91Q5T1B1 145 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 FAM78BQ5VT40 261 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 TMEM108Q6UXF1 575 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 C16orf82Q7Z2V1 217 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 MOB3BQ86TA1 216 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 DMRTC2Q8IXT2 367 aaPredicted RBP5.53□□□□□ -1.52
HMG20A-201ENST00000336216 ZNRF1Q8ND25 227 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 OR1L1Q8NH94 360 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 CCL13Q99616 98 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 ELOVL1Q9BW60 279 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 RNF122Q9H9V4 155 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 CLN8Q9UBY8 286 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 PAM16Q9Y3D7 125 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 DMDP11532 3685 aa5.53□□□□□ -1.52
HMG20A-201ENST00000336216 ELOA3CA0A087WX78 387 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-201ENST00000336216 OR2H2O95918 312 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 CD33P20138 364 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 TMEM241Q24JQ0 296 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 RNF151Q2KHN1 245 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 ACSM6Q6P461 480 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 VKORC1L1Q8N0U8 176 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 ZIC4Q8N9L1 334 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 KLF14Q8TD94 323 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-201ENST00000336216 LYZL4Q96KX0 146 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 MS4A10Q96PG2 267 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 DDA1Q9BW61 102 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 SEBOXQ9HB31 216 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-201ENST00000336216 PITPNC1Q9UKF7 332 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 LOC390937A0A1W2PQ73 354 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 DNPH1O43598 174 aa5.52□□□□□ -1.53
HMG20A-201ENST00000336216 GALR2O43603 387 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms