RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MUC21Q5SSG8 566 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 A0A1W2PQM1 296 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 EIF3GO75821 320 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTCH1-201ENST00000331920 CD1AP06126 327 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
PTCH1-201ENST00000331920 UNQ9370/PRO34162Q6UXP9 181 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 NPVFQ9HCQ7 196 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 ZNF488Q96MN9 340 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 A0A1B0GUL6 1792 aa14.29□□□□□ -0.12
PTCH1-201ENST00000331920 M0R381 172 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 ARL14EPLP0DKL9 152 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 TMEM249Q2WGJ8 235 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 DUX3Q96PT4 197 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 CLPPQ16740 277 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-201ENST00000331920 SLC52A3Q9NQ40 469 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 CBLN4Q9NTU7 201 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 TMEM106BQ9NUM4 274 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 HSPB1P04792 205 aaKnown RBP14.28□□□□□ -0.12
PTCH1-201ENST00000331920 TCF24Q7RTU0 167 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 VGLL1Q99990 258 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 TNFRSF12AQ9NP84 129 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 OR6X1Q8NH79 312 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 PPIAL4EA0A075B759 164 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 IGHV3OR16-13A0A075B7E8 117 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 IGHV3-74A0A0B4J1X5 117 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 PPIAL4DF5H284 164 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 ZNF688P0C7X2 276 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 PPIAL4FP0DN26 164 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 RUNX1Q01196 453 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 PPIAL4AQ9Y536 164 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 MUC1P15941 1255 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-201ENST00000331920 ATP6V0CP27449 155 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 MS4A5Q9H3V2 200 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 GRIFINA4D1Z8 144 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 TNFSF14O43557 240 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 KLK2P20151 261 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 ABHD1Q96SE0 405 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 PIMREGQ9BSJ6 248 aa14.28□□□□□ -0.12
PTCH1-201ENST00000331920 C1orf210Q8IVY1 113 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 SF3B6Q9Y3B4 125 aaKnown RBP14.27□□□□□ -0.12
PTCH1-201ENST00000331920 MYOM1P52179 1685 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 TNFSF10P50591 281 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 PSG9Q00887 426 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 LINC00299Q6ZSB3 139 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 ST6GALNAC6Q969X2 333 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 AICDAQ9GZX7 198 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 IL20Q9NYY1 176 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 MON2Q7Z3U7 1717 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 TMEM229AB2RXF0 380 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 PCMT1P22061 227 aa14.27□□□□□ -0.12
PTCH1-201ENST00000331920 RPL27AP46776 148 aaKnown RBP14.27□□□□□ -0.12
PTCH1-201ENST00000331920 ZNF658BQ4V348 819 aaPredicted RBP14.27□□□□□ -0.12
PTCH1-201ENST00000331920 NFAM1Q8NET5 270 aaPredicted RBP14.27□□□□□ -0.12
PTCH1-201ENST00000331920 GTF3C1Q12789 2109 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 A1L4Q6 167 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 SRD5A2P31213 254 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 PWWP2BQ6NUJ5 590 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 KCNE5Q9UJ90 142 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 TGIF2-C20orf24A0A0A6YYL0 155 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 C16orf97H3BN30 126 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 PRR35P0CG20 571 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 TM4SF4P48230 202 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 DMRTA1Q5VZB9 504 aa14.27□□□□□ -0.13
PTCH1-201ENST00000331920 LDLRAD1Q5T700 205 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 SPEM1Q8N4L4 309 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 SPSB4Q96A44 273 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 CRHP06850 196 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 TSPOP30536 169 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 PAX2Q02962 417 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 A0A0U1RQV5 110 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 TDGF1P3P51864 188 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 FAM209BQ5JX69 171 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 ZNF600Q6ZNG1 722 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 CCL19Q99731 98 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 SELENOTP62341 195 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 SPCS1Q9Y6A9 102 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 DOCK7Q96N67 2140 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 TRGC1P0CF51 173 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 KIR3DL3Q8N743 410 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 ISG15P05161 165 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 SEC11BP0C7V7 166 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 WNT10AQ9GZT5 417 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 TBX21Q9UL17 535 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 MCM3APO60318 1980 aa14.26□□□□□ -0.13
PTCH1-201ENST00000331920 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
PTCH1-201ENST00000331920 RND2P52198 227 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 PIK3C2AO00443 1686 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 C17orf51A8MQB3 221 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 C4AP0C0L4 1744 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 C4BP0C0L5 1744 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 PEAR1Q5VY43 1037 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 OR2K2Q8NGT1 345 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 DDA1Q9BW61 102 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 TDRD15B5MCY1 1934 aaKnown RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 ZNF48Q96MX3 618 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-201ENST00000331920 RARRES2Q99969 163 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 ASPDHA6ND91 283 aa14.25□□□□□ -0.13
PTCH1-201ENST00000331920 LHX8Q68G74 356 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms